Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0365
         (533 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125520-1|BAC86192.1|  154|Homo sapiens protein ( Homo sapiens ...    32   1.5  
U03105-1|AAA85576.1|  327|Homo sapiens B4-2 protein protein.           30   4.5  
BC018112-1|AAH18112.1|  327|Homo sapiens proline-rich nuclear re...    30   4.5  
AY303779-1|AAP76184.1|  248|Homo sapiens proline rich 2 protein ...    30   4.5  
AL353135-1|CAI16243.1|  327|Homo sapiens proline-rich nuclear re...    30   4.5  
CR456920-1|CAG33201.1|  128|Homo sapiens NDUFB6 protein.               30   5.9  
BC029247-1|AAH29247.1|  128|Homo sapiens NADH dehydrogenase (ubi...    30   5.9  
BC009801-1|AAH09801.1|  128|Homo sapiens NADH dehydrogenase (ubi...    30   5.9  
AL353671-8|CAH71257.1|  128|Homo sapiens NADH dehydrogenase (ubi...    30   5.9  
AL353671-7|CAH71258.1|  113|Homo sapiens NADH dehydrogenase (ubi...    30   5.9  
AF035840-1|AAC68838.1|  128|Homo sapiens NADH:ubiquinone oxidore...    30   5.9  
AK131407-1|BAD18554.1|  451|Homo sapiens protein ( Homo sapiens ...    29   7.8  

>AK125520-1|BAC86192.1|  154|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43532 fis, clone PLACE7001022. ).
          Length = 154

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
 Frame = -1

Query: 353 WHIRVNIRRCLGPHVCQARSLPFPILRGSWLG-------NSEGFRGIGGAS*STWCKAKE 195
           WH+R +  +  G H C   S P   L GSWLG          G   +G AS  +WC   +
Sbjct: 44  WHLRASRLQPSGSHGCPKSSGP---LLGSWLGCLALPDRRLLGSCLLGDASCRSWCGGGQ 100

Query: 194 GG 189
           GG
Sbjct: 101 GG 102


>U03105-1|AAA85576.1|  327|Homo sapiens B4-2 protein protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 190 PPSLALHHVL*-DAP---PMPRKPSELPNQEPRSMGNGNERA*QT*GPKQRR 333
           PP+L L H L  D P   P PR P+ LPN+   ++  G  RA     PK+RR
Sbjct: 52  PPTLFLPHFLGGDGPCLTPQPRAPAALPNRS-LAVAGGTPRA----APKKRR 98


>BC018112-1|AAH18112.1|  327|Homo sapiens proline-rich nuclear
           receptor coactivator 1 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 190 PPSLALHHVL*-DAP---PMPRKPSELPNQEPRSMGNGNERA*QT*GPKQRR 333
           PP+L L H L  D P   P PR P+ LPN+   ++  G  RA     PK+RR
Sbjct: 52  PPTLFLPHFLGGDGPCLTPQPRAPAALPNRS-LAVAGGTPRA----APKKRR 98


>AY303779-1|AAP76184.1|  248|Homo sapiens proline rich 2 protein
           protein.
          Length = 248

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 190 PPSLALHHVL*-DAP---PMPRKPSELPNQEPRSMGNGNERA*QT*GPKQRR 333
           PP+L L H L  D P   P PR P+ LPN+   ++  G  RA     PK+RR
Sbjct: 52  PPTLFLPHFLGGDGPCLTPQPRAPAALPNRS-LAVAGGTPRA----APKKRR 98


>AL353135-1|CAI16243.1|  327|Homo sapiens proline-rich nuclear
           receptor coactivator 1 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 190 PPSLALHHVL*-DAP---PMPRKPSELPNQEPRSMGNGNERA*QT*GPKQRR 333
           PP+L L H L  D P   P PR P+ LPN+   ++  G  RA     PK+RR
Sbjct: 52  PPTLFLPHFLGGDGPCLTPQPRAPAALPNRS-LAVAGGTPRA----APKKRR 98


>CR456920-1|CAG33201.1|  128|Homo sapiens NDUFB6 protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 418 KLWLRKL*N*SPVRMLEPRIYHGTSG*IFVVAWVLTSVKLVHYHFPYCVA 269
           K W + L N SP R +   +Y  +   IFV   VL  V ++HY+  Y V+
Sbjct: 45  KFWNKFLENKSPWRKMVHGVYKKS---IFVFTHVLVPVWIIHYYMKYHVS 91


>BC029247-1|AAH29247.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 418 KLWLRKL*N*SPVRMLEPRIYHGTSG*IFVVAWVLTSVKLVHYHFPYCVA 269
           K W + L N SP R +   +Y  +   IFV   VL  V ++HY+  Y V+
Sbjct: 45  KFWNKFLENKSPWRKMVHGVYKKS---IFVFTHVLVPVWIIHYYMKYHVS 91


>BC009801-1|AAH09801.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 418 KLWLRKL*N*SPVRMLEPRIYHGTSG*IFVVAWVLTSVKLVHYHFPYCVA 269
           K W + L N SP R +   +Y  +   IFV   VL  V ++HY+  Y V+
Sbjct: 45  KFWNKFLENKSPWRKMVHGVYKKS---IFVFTHVLVPVWIIHYYMKYHVS 91


>AL353671-8|CAH71257.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 418 KLWLRKL*N*SPVRMLEPRIYHGTSG*IFVVAWVLTSVKLVHYHFPYCVA 269
           K W + L N SP R +   +Y  +   IFV   VL  V ++HY+  Y V+
Sbjct: 45  KFWNKFLENKSPWRKMVHGVYKKS---IFVFTHVLVPVWIIHYYMKYHVS 91


>AL353671-7|CAH71258.1|  113|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 113

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 418 KLWLRKL*N*SPVRMLEPRIYHGTSG*IFVVAWVLTSVKLVHYHFPYCVA 269
           K W + L N SP R +   +Y  +   IFV   VL  V ++HY+  Y V+
Sbjct: 45  KFWNKFLENKSPWRKMVHGVYKKS---IFVFTHVLVPVWIIHYYMKYHVS 91


>AF035840-1|AAC68838.1|  128|Homo sapiens NADH:ubiquinone
           oxidoreductase B17 subunit protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 418 KLWLRKL*N*SPVRMLEPRIYHGTSG*IFVVAWVLTSVKLVHYHFPYCVA 269
           K W + L N SP R +   +Y  +   IFV   VL  V ++HY+  Y V+
Sbjct: 45  KFWNKFLENKSPWRKMVHGVYKKS---IFVFTHVLVPVWIIHYYMKYHVS 91


>AK131407-1|BAD18554.1|  451|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16513 fis, clone MESAN2001770, highly  similar
           to EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA. ).
          Length = 451

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 160 RQHYYSTFIKPPSLALHHVL*DAPPMPRKPSELPNQEP 273
           RQH+Y +  +PPS A   V   AP  P  P+ LP   P
Sbjct: 48  RQHFYPSRAQPPSSAASRVQSAAPARP-GPAALPPVSP 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,704,774
Number of Sequences: 237096
Number of extensions: 1906627
Number of successful extensions: 3460
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3459
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)