Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0365
         (533 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   3.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   3.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   3.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   3.4  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 146 VLPSW*TDYCHLHVDKVRELLQRCCQSLLEN 54
           VLP      C    DK RE++++  + L+EN
Sbjct: 67  VLPDALATDCKKCTDKQREVIKKVIKFLVEN 97


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 146 VLPSW*TDYCHLHVDKVRELLQRCCQSLLEN 54
           VLP      C    DK RE++++  + L+EN
Sbjct: 67  VLPDALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 146 VLPSW*TDYCHLHVDKVRELLQRCCQSLLEN 54
           VLP      C    DK RE++++  + L+EN
Sbjct: 67  VLPDALATDCKKCTDKQREVIKKVIKFLVEN 97


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 246 FPWHRWGILKY 214
           F +H+WGIL Y
Sbjct: 507 FSFHQWGILVY 517


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,922
Number of Sequences: 438
Number of extensions: 3353
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)