Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0365
         (533 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g17320.1 68418.m02029 homeobox-leucine zipper family protein ...    28   3.4  
At1g62700.1 68414.m07077 no apical meristem (NAM) family protein...    28   4.5  
At3g62900.1 68416.m07066 expressed protein ; expression supporte...    27   7.9  
At2g30615.1 68415.m03730 expressed protein                             27   7.9  
At1g21170.1 68414.m02647 expressed protein                             27   7.9  
At1g09000.1 68414.m01004 NPK1-related protein kinase, putative (...    27   7.9  

>At5g17320.1 68418.m02029 homeobox-leucine zipper family protein /
           lipid-binding START domain-containing protein similar to
            Roc1 (GI:1907210) [Oryza sativa]; contains Pfam
           PF00046: Homeobox domain and Pfam PF01852: START domain
          Length = 718

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 226 APPMPRKPSELPNQEPRS 279
           APP PRKP E+ N +P S
Sbjct: 215 APPQPRKPLEMQNFQPLS 232


>At1g62700.1 68414.m07077 no apical meristem (NAM) family protein
           similar to NAC2 (GI:6456751)  [Arabidopsis thaliana];
           contains Pfam PF02365 : No apical meristem (NAM) protein
          Length = 394

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 363 LGSNILTGDQFYNFLNHNFDRHYEQNRAPLGLYFHAAWLKNNP 491
           + S I++        NH+++RH+ Q   P GL    A+  NNP
Sbjct: 184 MASEIISSSPRQFLPNHHYNRHHHQQTLPCGL---NAFNNNNP 223


>At3g62900.1 68416.m07066 expressed protein ; expression supported
           by MPSS
          Length = 1401

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 223 DAPPMPRKPSELPNQEPRSMGNGNERA*QT*GPKQRRIFTRMCHG 357
           D  P PR  S++P +E  +   GN  +  T G K+R++  R  HG
Sbjct: 783 DIKPKPRVSSKMPKEEGGASDTGNSNS--TGGIKKRKL--RESHG 823


>At2g30615.1 68415.m03730 expressed protein
          Length = 190

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 229 PPMPRKPSELPNQEPR 276
           PP PR+PSEL N E R
Sbjct: 21  PPTPREPSELVNLEDR 36


>At1g21170.1 68414.m02647 expressed protein
          Length = 1090

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 194 PLWPYTMYFRMPHRCHGNLQSCPTRSHAVWEMVMNELDRR 313
           P+W Y       HR HG L+ C     A  E++ N++  R
Sbjct: 434 PVWHYLNV--QNHRIHGMLEKCTFDHEARMEILRNQVHER 471


>At1g09000.1 68414.m01004 NPK1-related protein kinase, putative
           (ANP1) similar to protein kinase [Nicotiana tabacum]
           gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
           protein kinase 1S GI:2342422
          Length = 666

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 533 KDLVYPIQESFQKFRVVFQPSCME 462
           K L  P+ E F    + F PSCME
Sbjct: 499 KKLQTPLYEEFYNSLITFSPSCME 522


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,338,990
Number of Sequences: 28952
Number of extensions: 262614
Number of successful extensions: 634
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)