Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0364
(633 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 149 1e-36
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 102 3e-22
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 95 4e-20
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 91 9e-19
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 87 1e-17
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 84 8e-17
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 76 2e-14
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 50 2e-06
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_14162| Best HMM Match : TonB_dep_Rec (HMM E-Value=3.7) 36 0.027
SB_54535| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 32 0.34
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_7902| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_57213| Best HMM Match : CUB (HMM E-Value=0.012) 29 3.1
SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_39260| Best HMM Match : DUF765 (HMM E-Value=9.6) 28 5.5
SB_15021| Best HMM Match : Zona_pellucida (HMM E-Value=0) 28 5.5
SB_51550| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_57029| Best HMM Match : DUF378 (HMM E-Value=5.6) 27 9.6
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 149 bits (362), Expect = 1e-36
Identities = 64/121 (52%), Positives = 93/121 (76%)
Frame = +3
Query: 270 TAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHIN 449
TAKERS ILR+W+DL +N D++A++IT ESGKPL EA+GEV Y +++E+F++ A+ +
Sbjct: 3 TAKERSIILRKWYDLILENIDDIAKIITLESGKPLLEARGEVLYAANYIEFFSEEAKRVY 62
Query: 450 GEIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTPL 629
G+IIPS P +++L+T+ P+GV + ITPWNFP AM+ RK + +A GCT + +PS TPL
Sbjct: 63 GDIIPSNNPGQKVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPSGQTPL 122
Query: 630 S 632
S
Sbjct: 123 S 123
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 103 bits (246), Expect = 2e-22
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Frame = +3
Query: 102 QAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQ---TWKDTT 272
+ ++N E+V S VF NP + ++ + D +D A+ A AF+ W+
Sbjct: 331 ELFINNEFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEAFKLGSAWRTMD 390
Query: 273 AKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHING 452
A R ++L + L +++ LA + T +SGK +++ G++ + ++A A + G
Sbjct: 391 ASMRGKLLYKLAQLIDRDIAYLASLETIDSGKLFSDSVGDMQSSANCFRYYAGWADKVTG 450
Query: 453 EIIPSPWPNKQILLTRN-PLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTPL 629
+ IP+ P + TR+ P+G+V ITPWNFP M + K+ +A G ++KP+E TPL
Sbjct: 451 KTIPADGP--YFVYTRHEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAEQTPL 508
Query: 630 S 632
+
Sbjct: 509 T 509
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 102 bits (244), Expect = 3e-22
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Frame = +3
Query: 99 NQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQT--WKDTT 272
+Q + +W A V NPA V+A VP ++ A++ A AF W
Sbjct: 44 HQCLIGDQWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAFDDSPWSRIK 103
Query: 273 AKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKG-EVAYGNSFLEWFADSARHIN 449
ER ++L + DL EKN LAE+ + ++GK A+ ++ FL + A A I
Sbjct: 104 PVERQKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVDIRLAVDFLRYMAGFATKIE 163
Query: 450 GEIIPS--PW-PNKQI--LLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPS 614
G + P+ P+ Q R +GVV I WNFP + K+G +A GCT V+KP+
Sbjct: 164 GRTVQVSVPFMPDAQFHGYTRREAVGVVGAIVAWNFPLLLACWKLGPALATGCTTVLKPA 223
Query: 615 EDTPLS 632
EDTPL+
Sbjct: 224 EDTPLT 229
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 95.1 bits (226), Expect = 4e-20
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Frame = +3
Query: 108 YVNGEWVKAKSNLVFAVHNPADDS-VVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKER 284
Y+ GEWV+ V + +PAD S V+ D + A+ A+ + W+ + ++R
Sbjct: 9 YIAGEWVEGNKGSVANI-SPADISDVIGHYAQADKAQTEAAIAAAAAGQREWQKSGLEQR 67
Query: 285 SRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIP 464
+L D D L ++ E GK LAE GE F ++A GE
Sbjct: 68 YSVLMAIGDELIARKDELGAILAREEGKTLAEGVGETYRSGQFFHYYAAEVLRQMGETAE 127
Query: 465 SPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTPLS 632
S P +I R P+GVV +ITPWNFP A K+ +A G V KP+ P S
Sbjct: 128 SVRPGIEIETRREPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPANQVPAS 183
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 90.6 bits (215), Expect = 9e-19
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Frame = +3
Query: 213 DAQNALLTASNAFQ---TWKDTTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEA 383
D A+ A AF+ W+ A R L + DLCE++ D LA + + + GK + EA
Sbjct: 1238 DVDIAVAAAKEAFKLGSVWRTMDASARGHFLYKLADLCERDADYLARLESYDGGKVINEA 1297
Query: 384 KGEVAYGNSFLEWFADSARHINGEIIPSPWPNKQILLTRN-PLGVVSVITPWNFPFAMIT 560
K +V ++A A + G+ IP+ P TR+ P+GVV ITPWNFP M
Sbjct: 1298 KIDVQGMIGCFRYYAGWADKVTGKTIPADGPF--FTYTRHEPVGVVGAITPWNFPLLMEG 1355
Query: 561 RKVGALMAGGCTCVIKPSEDTPLS 632
K+ +A GC ++KP+E TPL+
Sbjct: 1356 LKLAPALACGCVVILKPAEQTPLT 1379
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 86.6 bits (205), Expect = 1e-17
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Frame = +3
Query: 156 VHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDN 335
+ +P+ + EV + + A+L+A AF+TW + ER RIL L K ++
Sbjct: 295 ITDPSTGHISCEVKGSGKTEVKRAVLSARKAFKTWSVLSGSERGRILGDASRLVRKRRED 354
Query: 336 LAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIPSPWPNKQILLT-RNPLG 512
+A+V ++GKP EA +V LE++A A ++G+ + PN T R PLG
Sbjct: 355 IAKVEVHDNGKPFHEALWDVDNVADVLEYYAGVAPTLSGQHV--QLPNGSFAYTRREPLG 412
Query: 513 VVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTPLS 632
VV I WN+P K+ +A G T V KPS TP++
Sbjct: 413 VVGGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLTPMN 452
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 84.2 bits (199), Expect = 8e-17
Identities = 40/90 (44%), Positives = 59/90 (65%)
Frame = +3
Query: 90 LLRNQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDT 269
L+R++ YV G+W+ S F V+NPA + +V +M +K+ + A+ A AFQTWK T
Sbjct: 60 LIRHKGYVGGKWLDGDST--FPVYNPATGEELGQVANMGAKEGELAVQEAYKAFQTWKKT 117
Query: 270 TAKERSRILRRWFDLCEKNTDNLAEVITAE 359
TAKERS LR+WF L ++ + LAE++T E
Sbjct: 118 TAKERSEKLRKWFQLILQHQNELAELLTTE 147
Score = 57.6 bits (133), Expect = 8e-09
Identities = 34/91 (37%), Positives = 47/91 (51%)
Frame = +3
Query: 354 AESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIPSPWPNKQILLTRNPLGVVSVITP 533
A G E + AY +F W +A+ + ++ W + IL +N L +
Sbjct: 93 ANMGAKEGELAVQEAY-KAFQTWKKTTAKERSEKL--RKW-FQLILQHQNELAELLTTEQ 148
Query: 534 WNFPFAMITRKVGALMAGGCTCVIKPSEDTP 626
WNFP MITRK A +A GCT +IKPSE+TP
Sbjct: 149 WNFPLGMITRKAAAALAAGCTVIIKPSEETP 179
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 76.2 bits (179), Expect = 2e-14
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Frame = +3
Query: 102 QAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKE 281
Q ++NGE++ + ++P+ V +VPD + A+ A+ AF++W ++
Sbjct: 12 QNFINGEFLSCDRYI--DSYDPSRGEVYCKVPDSGKEHVDLAVAAANAAFKSWSVSSPAY 69
Query: 282 RSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKG-EVAYGNSFLEWFADSARHINGEI 458
R+ LR+ DL E + A+ + + GK + A+ ++ L FA + + G
Sbjct: 70 RAERLRKLADLIEDRLEEFAQAESRDQGKTVNFARNVDIPRCCLNLRMFASAI--MVGSN 127
Query: 459 IPSPWPNKQILLT---RNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTPL 629
+ + Q ++ R+P GV +I+PWN P +++ K+ +A GCT V KPSE T +
Sbjct: 128 SRANFLESQAVVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMTSV 187
Query: 630 S 632
+
Sbjct: 188 T 188
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 54.8 bits (126), Expect = 6e-08
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = +3
Query: 180 VVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDNLAEVITAE 359
V+A +++D ++A+ A AFQ+W R+R L +K+ +A + + +
Sbjct: 669 VLASTTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESMD 728
Query: 360 SGKPLAEAKG-EVAYGNSFLEWFADSARHINGEIIPSPWPNKQILLTRNPLGVVSVITPW 536
+GK + E + ++ L A A+ ++ E+ W P+GVV I PW
Sbjct: 729 NGKSVRETRDCDIPNVARHLYHHAGWAQLMDTEM--QGW---------KPVGVVGGIVPW 777
Query: 537 NFPFAMITRKVGALMAGGCTCVIKPSEDTPLS 632
NFP ++ KV +A G T V+KP+ T LS
Sbjct: 778 NFPLMLLCWKVCPALAMGNTVVLKPATYTRLS 809
Score = 46.4 bits (105), Expect = 2e-05
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 9/183 (4%)
Frame = +3
Query: 108 YVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERS 287
Y+ G + N + NP+ + V+A+V D + KD + A+ A A W A R+
Sbjct: 1151 YIGGAQKRPDGNYSRPILNPSGE-VIAQVADGNRKDIREAVEAAHKAASGWGKRAAHNRA 1209
Query: 288 RILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHING----- 452
+I+ + E +A I+ +G+ L E K EV L ++ A G
Sbjct: 1210 QIVYYLAENLEMRRAEVAARISDMTGQSLDECKAEVDASIQRLFYYGAYADKFGGNRPVF 1269
Query: 453 ---EIIPSPWP-NKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSED 620
+ P P + P+GV+ + P + + G T VI PSE
Sbjct: 1270 SDKDTKPEETPFYGATIKIHEPVGVIGIACPDECSLLAFVSLLAPAIIRGNTVVIVPSEK 1329
Query: 621 TPL 629
P+
Sbjct: 1330 YPV 1332
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +3
Query: 264 DTTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARH 443
+T +R ++R+ + L ++++ E GK E GE+ ++ +R
Sbjct: 68 ETPGPKRGEVVRQIGHALREKLTPLGKLLSLEVGKIFPEGVGEIQEYIDVCDYAVGLSRM 127
Query: 444 INGEIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAM 554
+G++ PS P +L NP+G V VIT +NFP A+
Sbjct: 128 FDGKVFPSERPGHALLEQWNPVGTVGVITAFNFPVAV 164
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +3
Query: 255 TWKDTTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEW--FA 428
++++ E + R + DL EK +++ ++ T ++G ++ A + N L
Sbjct: 68 SYREAKVIESLELPRNYRDLLEKRSEDFSKAETLDTGTVISRANNNKEFANEVLNIRVLV 127
Query: 429 DSARHINGEIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIK 608
D A I GE R+ LGVV++IT W+ I R + MA G VIK
Sbjct: 128 DHALSIMGESTAEG--GTLCYSIRHSLGVVAIITSWSQALPSILRHLVPAMASGNCVVIK 185
Query: 609 PSEDTPLS 632
PS PL+
Sbjct: 186 PSCLAPLT 193
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 492 LTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSE 617
+ PLGV +I+ WN+P +I + +AGG V+KPSE
Sbjct: 68 IKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSE 109
>SB_14162| Best HMM Match : TonB_dep_Rec (HMM E-Value=3.7)
Length = 412
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 168 ADDSVVAEVPDMDSKDAQNALLTASNAFQT--WKDTTAKERSRILRRWFDLCEKNTDNLA 341
ADD + + D+ + ALL A++A Q W++ + +ER +L + L + + + +
Sbjct: 102 ADDHLQFKFTHTDAINDNQALLFAASALQDNGWREQSGRERQEVLLKHLWLLDDDNELIT 161
Query: 342 EVITAESGKPLAEAKGEVAYGNS 410
++ + +A + E AY NS
Sbjct: 162 QLQASTLTDEMATSLSETAYQNS 184
>SB_54535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 108 YVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDT 269
++NGE+V + + +P V+ PD + D +NA+ A +A W T
Sbjct: 10 FINGEFVPGEDGVYMNDLSPTTGEVICTFPDSNVVDTENAIRAAKSAGIIWAAT 63
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 162 NPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAK 278
+PA + +V +M ++ + A+ A FQTWK TTAK
Sbjct: 115 SPATGDELGQVSNMGAQQWELAVNAAYKEFQTWKKTTAK 153
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 99 NQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNAL 230
+Q ++NGE+V + F NP D +V+A+V +D +A+
Sbjct: 709 HQLFINGEFVDSHHGKTFNTINPTDGTVLAQVSLATHEDVDDAV 752
>SB_7902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1020
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 141 NLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCE 320
+L+ ++H+ S + S D Q+ +LT +++ TW +T S+ R F +
Sbjct: 460 DLIASIHSQRGPSSCFAYNVVGSYDTQSDVLTLNHSLITWNNTPISRCSQACRAGFYILR 519
Query: 321 KNTD 332
K +D
Sbjct: 520 KPSD 523
>SB_57213| Best HMM Match : CUB (HMM E-Value=0.012)
Length = 238
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 342 EVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIPSPWPNKQI--LLTRNPLGV 515
+ IT S P+ E+K Y NS+ + S+ H+ P P PN++ LLT P
Sbjct: 63 DTITCTSD-PVLESKD---YCNSYYKPINKSSGHLTSPEFPQPSPNRRCRWLLTSPPGYR 118
Query: 516 VSVITPW 536
V VI W
Sbjct: 119 VQVIFRW 125
>SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 438 RHINGEIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKP 611
+H + +IPS + +++ + +N L V N F + R GA GC +KP
Sbjct: 275 QHSHITLIPSSYSDQRYYIEKNLLNSVRHNLSLNKAFCKLERPQGASQRKGCLWSLKP 332
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 430 SANHSRNELP*ATSPLASASGFPDSAV 350
S HSRN+ AT LAS SG+ +AV
Sbjct: 501 SQTHSRNDTFSATQTLASVSGYDSNAV 527
>SB_39260| Best HMM Match : DUF765 (HMM E-Value=9.6)
Length = 175
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 291 ILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNS 410
I R WF LC L I+ +P EA G A NS
Sbjct: 15 IRRDWFSLCSSGKSLLEGDISGRVYRPSVEAAGGTASSNS 54
>SB_15021| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 751
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 369 PLAEAKGEVAYGNSFLEWFADSARHINGEIIPSPWPNKQI--LLTRNPLGVVSVITPW 536
P+ E+K Y NS+ + S+ H+ P P PN++ LLT P V VI W
Sbjct: 9 PVLESKD---YCNSYYKPINKSSGHLTSPEFPQPSPNRRCRWLLTSPPGYRVQVIFRW 63
>SB_51550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 590
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -3
Query: 622 VSSEGLMTQVHPPAIKAPTFLVIIAKGKFQGVITE 518
V+SEG ++ P K PTF+++ +G+ + +IT+
Sbjct: 288 VASEG---RIEPLITKCPTFILVAGEGRVEPLITK 319
>SB_57029| Best HMM Match : DUF378 (HMM E-Value=5.6)
Length = 121
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/62 (38%), Positives = 30/62 (48%)
Frame = +3
Query: 198 DMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLA 377
+ D DA L+ ASNAF TA R+L + NT E+I+AES PLA
Sbjct: 37 EADDTDAI-ILIDASNAFNALNRATALHNIRVLCPIIAIYAINTGG-KEIISAES-DPLA 93
Query: 378 EA 383
A
Sbjct: 94 VA 95
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,626,806
Number of Sequences: 59808
Number of extensions: 478045
Number of successful extensions: 956
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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