Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0364
(633 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 197 6e-51
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 114 5e-26
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 113 1e-25
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 104 4e-23
At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative / anti... 102 2e-22
At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative / anti... 102 2e-22
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 97 1e-20
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 96 2e-20
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 91 7e-19
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 74 9e-14
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 74 9e-14
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 56 1e-08
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 56 1e-08
At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar ... 46 3e-05
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 46 3e-05
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 44 6e-05
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 44 6e-05
At5g62530.1 68418.m07848 delta-1-pyrroline-5-carboxylate dehydro... 40 0.001
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 35 0.052
At4g31030.1 68417.m04407 expressed protein 31 0.84
At3g28970.1 68416.m03621 expressed protein contains Pfam domain ... 30 1.1
At1g69280.1 68414.m07943 expressed protein 30 1.1
At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1... 29 1.9
At1g74140.1 68414.m08587 hypothetical protein 29 2.6
At3g66652.1 68416.m00776 fip1 motif-containing protein contains ... 29 3.4
At3g29375.1 68416.m03690 XH domain-containing protein contains P... 29 3.4
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 28 4.5
At3g62480.1 68416.m07020 hypothetical protein 28 5.9
At5g56730.1 68418.m07080 peptidase M16 family protein / insulina... 27 7.8
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 27 7.8
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 197 bits (480), Expect = 6e-51
Identities = 87/181 (48%), Positives = 126/181 (69%)
Frame = +3
Query: 90 LLRNQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDT 269
LLR Q + G+W+ + N V+NPA ++A+V M +K+ +A+ ++ AF +W
Sbjct: 50 LLRTQGLIGGKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRL 109
Query: 270 TAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHIN 449
TA ERS++LRRW+DL + + L ++IT E GKPL EA GEVAYG SF+E++A+ A+ +
Sbjct: 110 TAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVY 169
Query: 450 GEIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTPL 629
G+IIP ++++L+ + P+GVV ITPWNFP AMITRKVG +A GCT V+KPSE TPL
Sbjct: 170 GDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPL 229
Query: 630 S 632
+
Sbjct: 230 T 230
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 114 bits (274), Expect = 5e-26
Identities = 66/180 (36%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Frame = +3
Query: 102 QAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQT--WKDTTA 275
Q + G +V A S F +P + V+A+V + D++D A+ A AF W TA
Sbjct: 55 QLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPWPKMTA 114
Query: 276 KERSRILRRWFDLCEKNTDNLAEVITAESGKPLAE-AKGEVAYGNSFLEWFADSARHING 452
ERS+IL R+ DL EK+ D +A + T ++GKP + A+ EV ++A A I+G
Sbjct: 115 YERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADKIHG 174
Query: 453 EIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTPLS 632
+P P+ + P+GV I PWNFP M++ K+G +A G T V+K +E TPLS
Sbjct: 175 MTMPGDGPH-HVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLS 233
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 113 bits (271), Expect = 1e-25
Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Frame = +3
Query: 102 QAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQT--WKDTTA 275
Q +NG +V + S F +P V+A V + D++D A+ A AF W +A
Sbjct: 59 QLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSA 118
Query: 276 KERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEA-KGEVAYGNSFLEWFADSARHING 452
ERSR+L R+ DL EK+++ LA + T ++GKP ++ E+ ++A A I+G
Sbjct: 119 YERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHG 178
Query: 453 EIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTPLS 632
IP+ N Q+ P+GV I PWNFP M KVG +A G T V+K +E TPL+
Sbjct: 179 LTIPADG-NYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLT 237
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 104 bits (250), Expect = 4e-23
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Frame = +3
Query: 57 KCTWSQCRRLHLLR-NQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALL 233
KC + +L ++ + ++NG+++ A S F +P + V+A + + D +D A+
Sbjct: 5 KCNGATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVDLAVN 64
Query: 234 TASNAFQ--TWKDTTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAK-GEVAYG 404
A AF W T ER++++ ++ DL E+N + LA++ + GK K ++
Sbjct: 65 AARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPAT 124
Query: 405 NSFLEWFADSARHINGEIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMA 584
+ A +A I+GE + + + P+GVV I PWNFP M KV MA
Sbjct: 125 AGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMA 184
Query: 585 GGCTCVIKPSEDTPLS 632
GCT V+KP+E T LS
Sbjct: 185 AGCTMVVKPAEQTSLS 200
>At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 102 bits (244), Expect = 2e-22
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Frame = +3
Query: 105 AYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKER 284
+YV G+W +A LV + NPA++ +A+V + +D + L A + W TA +R
Sbjct: 23 SYVAGKW-QANGPLVSTL-NPANNQPIAQVVEASLEDYEQGLKACEEAAKIWMQVTAPKR 80
Query: 285 SRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIP 464
I+R+ D D L +++ E GK LAE GEV ++ +R +NG +IP
Sbjct: 81 GDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
Query: 465 SPWPNKQILLTRNPLGVVSVITPWNFPFAMI-TRKVGALMAGGCTCVIKPSEDTPL 629
S PN +L NPLG+V VIT +NFP A++ AL+ G C V K + TPL
Sbjct: 141 SERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCV-VWKGAPTTPL 195
>At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 102 bits (244), Expect = 2e-22
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Frame = +3
Query: 105 AYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKER 284
+YV G+W +A LV + NPA++ +A+V + +D + L A + W TA +R
Sbjct: 23 SYVAGKW-QANGPLVSTL-NPANNQPIAQVVEASLEDYEQGLKACEEAAKIWMQVTAPKR 80
Query: 285 SRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIP 464
I+R+ D D L +++ E GK LAE GEV ++ +R +NG +IP
Sbjct: 81 GDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
Query: 465 SPWPNKQILLTRNPLGVVSVITPWNFPFAMI-TRKVGALMAGGCTCVIKPSEDTPL 629
S PN +L NPLG+V VIT +NFP A++ AL+ G C V K + TPL
Sbjct: 141 SERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCV-VWKGAPTTPL 195
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 96.7 bits (230), Expect = 1e-20
Identities = 55/172 (31%), Positives = 88/172 (51%)
Frame = +3
Query: 111 VNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSR 290
+ G +V+++S+ V NPA VV++VP +++ + A+ A AF W++T R R
Sbjct: 118 IGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQR 177
Query: 291 ILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIPSP 470
++ ++ +L KN D LA IT E GK L ++ G++ G +E A GE +P+
Sbjct: 178 VMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNV 237
Query: 471 WPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTP 626
R PLGV + I P+NFP + + G T ++KPSE P
Sbjct: 238 SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDP 289
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 95.9 bits (228), Expect = 2e-20
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Frame = +3
Query: 96 RNQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAF-----QTW 260
R Q ++ G+W + V NPA + ++ +P S+D + A+ A AF + W
Sbjct: 7 RRQLFIGGQWTEPVLRKTLPVVNPATEDIIGYIPAATSEDVELAVEAARKAFTRNNGKDW 66
Query: 261 KDTTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSAR 440
T R++ LR + LA + + GKPL EA ++ E++AD A
Sbjct: 67 ARATGAVRAKYLRAIAAKVIERKSELANLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAE 126
Query: 441 HINGEI---IPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKP 611
++ + + P + + + P+GVV +ITPWN+P M KV +A GCT ++KP
Sbjct: 127 GLDAKQKTPLSLPMDTFKGYILKEPIGVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKP 186
Query: 612 SE 617
SE
Sbjct: 187 SE 188
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 90.6 bits (215), Expect = 7e-19
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Frame = +3
Query: 102 QAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAF-----QTWKD 266
Q +++GEW + + NPA + V+ ++P ++D A+ A A + W
Sbjct: 9 QLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAK 68
Query: 267 TTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHI 446
R++ LR + +LA++ + GKPL EA ++ E++AD A +
Sbjct: 69 APGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEGL 128
Query: 447 NGEI---IPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSE 617
+ + + P + + + + PLGVV +ITPWN+P M KV +A GCT ++KPSE
Sbjct: 129 DAKQKAPVSLPMESFKSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSE 188
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 73.7 bits (173), Expect = 9e-14
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Frame = +3
Query: 108 YVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERS 287
Y +GEW + S A+ NPA +V ++ + A +A ++W T +R+
Sbjct: 19 YADGEWKTSSSGKSVAIMNPATRKTQYKVQACTQEEVNAVMELAKSAQKSWAKTPLWKRA 78
Query: 288 RILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGE---I 458
+L + + + N +AE + E KP ++ EV + + A+ I GE +
Sbjct: 79 ELLHKAAAILKDNKAPMAESLVKEIAKPAKDSVTEVVRSGDLISYCAEEGVRILGEGKFL 138
Query: 459 IPSPWP----NKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKP 611
+ +P K L ++ PLGVV I P+N+P + K+ + G + V+KP
Sbjct: 139 LSDSFPGNDRTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 193
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 73.7 bits (173), Expect = 9e-14
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Frame = +3
Query: 108 YVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERS 287
Y +GEW + S A+ NPA +V ++ + A +A ++W T +R+
Sbjct: 19 YADGEWKTSSSGKSVAIMNPATRKTQYKVQACTQEEVNAVMELAKSAQKSWAKTPLWKRA 78
Query: 288 RILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGE---I 458
+L + + + N +AE + E KP ++ EV + + A+ I GE +
Sbjct: 79 ELLHKAAAILKDNKAPMAESLVKEIAKPAKDSVTEVVRSGDLISYCAEEGVRILGEGKFL 138
Query: 459 IPSPWP----NKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKP 611
+ +P K L ++ PLGVV I P+N+P + K+ + G + V+KP
Sbjct: 139 LSDSFPGNDRTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 193
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Frame = +3
Query: 159 HNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDNL 338
+ PA + P + + + + + A +TW ++ K R + LR ++ + +
Sbjct: 69 YEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKYIIEHQELI 128
Query: 339 AEVITAESGKPLAEAK-GEVAYGNSFLEWF-ADSARHINGEIIPS--PWPNKQILLTRNP 506
EV + ++GK + +A GE+ + W ++ R + E S +K + +P
Sbjct: 129 CEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHP 188
Query: 507 LGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSE 617
LGV+ I PWN+PF I + A + G VIK SE
Sbjct: 189 LGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Frame = +3
Query: 159 HNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDNL 338
+ PA + P + + + + + A +TW ++ K R + LR ++ + +
Sbjct: 69 YEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKYIIEHQELI 128
Query: 339 AEVITAESGKPLAEAK-GEVAYGNSFLEWF-ADSARHINGEIIPS--PWPNKQILLTRNP 506
EV + ++GK + +A GE+ + W ++ R + E S +K + +P
Sbjct: 129 CEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHP 188
Query: 507 LGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSE 617
LGV+ I PWN+PF I + A + G VIK SE
Sbjct: 189 LGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
>At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 390
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +3
Query: 492 LTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTP 626
+ PLGVV VI+ WNFPF + V +A G V+KPSE P
Sbjct: 171 IVSEPLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAP 215
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +3
Query: 492 LTRNPLGVVSVITPWNFPFAMITRKVGALMAGGCTCVIKPSEDTP 626
+ PLGVV VI+ WNFPF + V +A G V+KPSE P
Sbjct: 171 IVSEPLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAP 215
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 492 LTRNPLGVVSVITPWNFPFAM-ITRKVGALMAGGCTCVIKPSEDTPLS 632
+ PLGVV VI+ WN+PF + I +GA+ AG V+KPSE P S
Sbjct: 108 IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAV-VLKPSELAPAS 154
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 492 LTRNPLGVVSVITPWNFPFAM-ITRKVGALMAGGCTCVIKPSEDTPLS 632
+ PLGVV VI+ WN+PF + I +GA+ AG V+KPSE P S
Sbjct: 108 IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAV-VLKPSELAPAS 154
>At5g62530.1 68418.m07848 delta-1-pyrroline-5-carboxylate
dehydrogenase (P5CDH) identical to
delta-1-pyrroline-5-carboxylate dehydrogenase precursor
[Arabidopsis thaliana] gi|15383744|gb|AAK73756;
identical to cDNA delta-1-pyrroline-5-carboxylate
dehydrogenase precursor (P5CDH) nuclear gene for
mitochondrial product GI:15383743; contains Pfam profile
PF00171:aldehyde dehydrogenase (NAD) family protein
Length = 556
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +3
Query: 321 KNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFA-DSARHINGEI-IPSPWPNKQILL 494
K D A +I + K +A GEV FLE F D R + IP +Q
Sbjct: 133 KVADFFARLIQRVAPKSYQQAAGEVFVTRKFLENFCGDQVRFLARSFAIPGNHLGQQSHG 192
Query: 495 TRNPLGVVSVITPWNFPFAM-ITRKVGALMAG 587
R P G V+++TP+NFP + + + +GAL G
Sbjct: 193 YRWPYGPVTIVTPFNFPLEIPLLQLMGALYMG 224
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 34.7 bits (76), Expect = 0.052
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 504 PLGVVSVITPWNFPFAM-ITRKVGALMAGGCTCVIKPSEDTP 626
P G V V++ WNFP ++ + +GA+ AG T ++K SE +P
Sbjct: 108 PYGTVLVLSSWNFPISLSLDPLIGAIAAGN-TVLLKSSELSP 148
>At4g31030.1 68417.m04407 expressed protein
Length = 44
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 434 TIRKPLQERITISNFPFGLSEWFPRFSCYHFCQIIGIFFT 315
TI KP +E +S+ FG W F C C+I+ IFFT
Sbjct: 3 TINKPTKE--ALSDMGFG--PWNLGFGCMFTCEIVVIFFT 38
>At3g28970.1 68416.m03621 expressed protein contains Pfam domain
PF03556: Domain of unknown function (DUF298)
Length = 295
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 231 LTASNAFQTWKDTTAKERSRILRRWFDLCEKN-TDNLAE 344
+T S A WK A R R+L RW D EKN N++E
Sbjct: 105 ITISRAITAWKLVLAG-RFRLLNRWCDFIEKNQRHNISE 142
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 81 RLHLLRNQAYVNGEWVKAKSNLVF--AVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQ 254
R L + + +GE K+ L F A+H PAD S + + DM+ K + +SN+
Sbjct: 188 RDELFSYRDFKSGEITKSGELLSFCPAIHGPADSSDLGKSFDMEDKASGECEDKSSNSNV 247
Query: 255 TWKD 266
+W++
Sbjct: 248 SWRN 251
>At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1
family protein similar to 13S condensin XCAP-D2 subunit
[Xenopus laevis] GI:3764087; contains Pfam profile
PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1
Length = 1439
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +3
Query: 261 KDTTAKERSRILRRWFDLCEKNTDNLA---EVITAESGK 368
+D +A RSR+L+ W +LCE+++ ++ EV + +G+
Sbjct: 383 RDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVASLSAGR 421
>At1g74140.1 68414.m08587 hypothetical protein
Length = 277
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 424 NHSRNELP*ATSPLASASGFPDSAVITSAKLSVFFSHK-SNHLLKIR 287
N SR+ LP S +S F SAV SAK+ FF+ K N LK++
Sbjct: 33 NQSRHLLPSRLSSPSSVPHFVPSAVSRSAKVHGFFASKLGNTNLKLK 79
>At3g66652.1 68416.m00776 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 980
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 491 KYLLIRPWARYDFSINMTSTIRKPLQERITISN--FPFGLSE 372
+Y PW+R F +N+ +KP ++ T ++ F FGL+E
Sbjct: 146 RYSFPNPWSRTPFDVNLDVLEKKPWRDPGTDTSDFFNFGLNE 187
>At3g29375.1 68416.m03690 XH domain-containing protein contains Pfam
profile: PF03469: XH domain
Length = 335
Score = 28.7 bits (61), Expect = 3.4
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 9/141 (6%)
Frame = +3
Query: 90 LLRNQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDT 269
LL + Y N E ++A+ L+ + + DD V M D + + AS T DT
Sbjct: 168 LLVKERYANDEILEAQKLLISQMRDLTDDRTTIRVKRMGHLDVE-PFVKASKRRLTGNDT 226
Query: 270 TA-KERSRILR--RWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSAR 440
E LR W T N+ + + E + L + E +G + +
Sbjct: 227 EVYAEWEENLRDPHWQPFKRVETGNIVKEVVDEEDEKLKNLREE--WGEEVMNAVKTALE 284
Query: 441 HIN------GEIIPSPWPNKQ 485
+N ++P+ W ++Q
Sbjct: 285 EVNEFNPSGRHVVPTLWNSEQ 305
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 862
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 548 KGEVPGSNYRNNSKRVSCEKYLLIRPWARYDFSINMTSTIRKPLQERITISNFPFGLSE 372
+G VP + +N R+ C+ I +A+ + S + STI + I+ S+ FGLSE
Sbjct: 111 EGIVPNTRSNSNRYRIPCQ----IHVFAKLEASSTVKSTISRGGLVLISESDTSFGLSE 165
>At3g62480.1 68416.m07020 hypothetical protein
Length = 166
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 264 LSMFETH*MRLVTRSVHLLNPYPAPLLLHCRQLD 163
++M E+H + HLL P P LL +C D
Sbjct: 1 MAMLESHPRHWLKNGFHLLAPMPDVLLSYCEDCD 34
>At5g56730.1 68418.m07080 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 956
Score = 27.5 bits (58), Expect = 7.8
Identities = 9/43 (20%), Positives = 24/43 (55%)
Frame = -1
Query: 441 DEHYPQTTPGTNYHKQLPLWPQRVVSQIQLLSLLPNYRYFFHI 313
D H+ G+ Y ++LP+ ++V+ + ++ Y+ ++H+
Sbjct: 185 DSHWQLMMEGSKYAERLPIGLEKVIRSVPAATVKQFYQKWYHL 227
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 219 QNALLTASNAFQTWKDTTAKERSRILRRWF--DLC 317
Q A NA Q+WK ++ S +L+ W D+C
Sbjct: 65 QQTTNAAYNALQSWKSAITEDPSGVLKTWVGEDVC 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,962,703
Number of Sequences: 28952
Number of extensions: 327818
Number of successful extensions: 855
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -