Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0362
         (552 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0950 - 9428506-9428693,9429223-9429595,9430127-9430572,943...    27   10.0 
05_05_0203 - 23229538-23229720,23229808-23230007,23230087-232307...    27   10.0 

>08_01_0950 -
           9428506-9428693,9429223-9429595,9430127-9430572,
           9430654-9430785,9431129-9431236,9431428-9431533
          Length = 450

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 99  ITALEHFYNTLHYTPFHNKELSLKSK 22
           I+ ++ FY+  H+ P HN  L+ +S+
Sbjct: 148 ISLIDGFYSIYHFVPEHNHNLATRSQ 173


>05_05_0203 -
           23229538-23229720,23229808-23230007,23230087-23230718,
           23231493-23231844,23231926-23232136,23232413-23232472
          Length = 545

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 99  ITALEHFYNTLHYTPFHNKELSLKSK 22
           I+ ++ FY+  H+ P HN  L+ +S+
Sbjct: 123 ISLIDGFYSIYHFVPEHNHNLATRSQ 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,948,053
Number of Sequences: 37544
Number of extensions: 153426
Number of successful extensions: 240
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)