Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0360
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 135  C*HVRFYFQVFKRST*SRQPHE 200
            C H+ + F V   S+ + +PH+
Sbjct: 2350 CTHINYGFAVLDSSSMTLKPHD 2371


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 366  FVQPWAVTDDDDGTLSL 416
            F+Q    +DDD+G++ +
Sbjct: 1095 FLQSGGTSDDDEGSIEI 1111


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 366  FVQPWAVTDDDDGTLSL 416
            F+Q    +DDD+G++ +
Sbjct: 1095 FLQSGGTSDDDEGSIEI 1111


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 366  FVQPWAVTDDDDGTLSL 416
            F+Q    +DDD+G++ +
Sbjct: 1095 FLQSGGTSDDDEGSIEI 1111


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 366  FVQPWAVTDDDDGTLSL 416
            F+Q    +DDD+G++ +
Sbjct: 1095 FLQSGGTSDDDEGSIEI 1111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,402
Number of Sequences: 336
Number of extensions: 1880
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)