Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0359
(626 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr... 165 3e-42
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 29 0.42
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 1.7
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 27 2.9
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 3.9
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 26 5.1
SPCC594.04c |||steroid oxidoreductase superfamily protein|Schizo... 26 5.1
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 26 5.1
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 5.1
SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr 3||... 25 6.8
SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4 desaturase... 25 9.0
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 25 9.0
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 25 9.0
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 9.0
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 25 9.0
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 9.0
>SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 322
Score = 165 bits (402), Expect = 3e-42
Identities = 82/137 (59%), Positives = 101/137 (73%)
Frame = +1
Query: 79 LKSRVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAEHGIK 258
+ S++ D L + FG +IL I+PGRVS EVDAR SFD +I KA I L+ GI
Sbjct: 66 INSQIEIAFDRLLIEFGTKILAIVPGRVSTEVDARYSFDTQTTIEKARHLIKLYEAEGIG 125
Query: 259 KERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLY*AIACAEANVTLISPFVGRILD 438
+ER+LIK+AST+EGIQAAK+LE++ GIHCNLTLLFS A+ACAEANVTLISPFVGRILD
Sbjct: 126 RERVLIKIASTYEGIQAAKQLEEE-GIHCNLTLLFSFVQAVACAEANVTLISPFVGRILD 184
Query: 439 WYVEHTKKTYEGKEDPG 489
+Y + Y +EDPG
Sbjct: 185 FYKAKNNRDYTAQEDPG 201
Score = 85.8 bits (203), Expect = 5e-18
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +2
Query: 473 ARKTPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIRELAGCDLLTISP 622
A++ PGVVSV+ I+NYYKKFGYKT VMGASFRN GEI+ELAG D LTISP
Sbjct: 196 AQEDPGVVSVSNIFNYYKKFGYKTIVMGASFRNVGEIKELAGVDFLTISP 245
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.42
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -1
Query: 263 SFLIPCSANKLINLIAFAMLASLSNDNLASTSTDTRPGIIFNISHPKSTLSISKVSATLL 84
S LIP +K +A +SL ++NLA+ + T IF+++ PK S + L
Sbjct: 159 SILIPTFVSKFNEFLALD--SSLRDNNLATVAVITTDKAIFSLNVPKKKRSQRWIHREHL 216
Query: 83 FN 78
FN
Sbjct: 217 FN 218
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 221 LNLSIYLLNMVLKKKEF*LNWPPLGKEFKQPKSWRRSMESIV 346
L+ SI + + ++ +F L+ P+ ++FK +S+RR ++S++
Sbjct: 362 LDTSISQIRVTHEQAKFLLSVIPVNQDFKALQSYRRILDSVI 403
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 26.6 bits (56), Expect = 2.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 194 SNDNLASTSTDTRPGIIFNISHPKSTLSISKVSATLLFNGASIILSIFNSFIKNVPSCR 18
SN++L + + +NI + IS V T LF S+IL + I V +CR
Sbjct: 34 SNESLYLLAYSHFLNLDYNIVYDLLDRVISHVPCTYLFARTSLILGRYKQGISAVEACR 92
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 235 LFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNL 351
L +G K I++ + T + IQ L +KH IHC+L
Sbjct: 788 LIKSNGFKGLPIVVIKSITRQLIQCLTLLNEKHVIHCDL 826
>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 588
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 223 KFINLFAEHGIKKERI-LIKLASTWEGIQAA 312
+ ++LF+ HG++KE + L+ AS + IQ A
Sbjct: 216 RILSLFSFHGVRKESLELLWRASKYPNIQGA 246
>SPCC594.04c |||steroid oxidoreductase superfamily
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 25.8 bits (54), Expect = 5.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 431 YWIGMLNIQRRLMRARKTPGVVSVTKIYNYYKKFGY 538
Y +G RRLM + S YNYY+K GY
Sbjct: 92 YGLGYNIASRRLMIMAFLQTLWSARLTYNYYRKGGY 127
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -1
Query: 194 SNDNLASTSTDTRPGIIFNISHPK----STLSISKVSATLLFNGASIILSI 54
S D ++T+TD RP ++ + S+L S+ ++T++ N +S SI
Sbjct: 618 SKDTKSATTTDERPSDFIRLNSEESVGTSSLRTSQTTSTIVSNDSSSTASI 668
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 329 FFSNSLAA*IPSQVEANLIKILSFLIPCSANKLI 228
FF+ SLA IP V + + + LIP A K++
Sbjct: 885 FFAQSLATPIPEPVPVDNMPTFTVLIPHYAEKIL 918
>SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 454
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 256 KKERILIKLASTWEGIQAAKEL 321
+K+ I + + WEG+Q AKEL
Sbjct: 299 EKKTITLHNGNQWEGLQMAKEL 320
>SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4
desaturase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 362
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 331 HGIHCNLTLLFSLY*AIACAEANVTLISPFVGRILDWYVEHTKKTYEG 474
H + NL +LY C AN+ + +PF +++EH Y+G
Sbjct: 110 HELSHNLGFKKTLYNRAYCLFANLPVGAPFAASFRPYHMEH--HAYQG 155
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 422 LVVYWIGMLNIQRRLMRARKTPGVVSVTKIYNYYKKFGYKTQVMGAS 562
+ V +IG+ + + PG V +++IY++ + YK Q + S
Sbjct: 1 MYVNYIGLFAFVQISLTLAYPPGRVEISEIYDFEESSSYKGQDIDTS 47
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 411 Y*CNICFSTGNSLVQR--EQQCKIT 343
Y CN F+ NSLV R +Q C +T
Sbjct: 500 YFCNDIFAPSNSLVDRTLDQTCTVT 524
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 422 LVVYWIGMLNIQRRLMRARKTPGVVSVTKIYNYYKKFGYKTQVMGAS 562
+ V +IG+ + + PG V +++IY++ + YK Q + S
Sbjct: 1 MYVNYIGLFAFVQISLTLAYPPGRVEISEIYDFEESSSYKGQDIDTS 47
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 436 DWYVEHTKKTYEGKEDPGSSF 498
DW+ E K GKE PG+++
Sbjct: 97 DWFYERKKFKNAGKEMPGATY 117
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 482 SSLPS*VFFVCSTYQSNIRPTNGDISVTFASAQAIA*YKENNSVR 348
SS+ S FVC +P S++ S + +K NNS+R
Sbjct: 868 SSINSKEAFVCLDRSKESKPIESCFSLSIQSVYMQSQFKYNNSIR 912
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,794,298
Number of Sequences: 5004
Number of extensions: 59686
Number of successful extensions: 191
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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