Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0359
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   180   1e-45
AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical ...    85   5e-17
AC084159-6|AAK39360.1|   97|Caenorhabditis elegans Hypothetical ...    42   3e-04
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81493-7|CAE46664.1|  342|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81493-6|CAB04038.1|  335|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AF067214-8|AAC17008.1|   69|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z93396-7|CAL49449.1|  196|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  180 bits (437), Expect = 1e-45
 Identities = 87/130 (66%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
 Frame = +1

Query: 103 LDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAEHGIKKERILIKL 282
           +D L V+FG EILK IPGRVS EVDARLSFD  ASI +A+  I  + + GI K+RILIKL
Sbjct: 73  MDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEKEGISKDRILIKL 132

Query: 283 ASTWEGIQAAKELEKKHGIHCNLTLLFSLY*AIACAEANVTLISPFVGRILDWYVEHT-K 459
           ASTWEGI+AAK LE KHGIHCN+TLLF+   A+ACAE+ VTLISPFVGRI+DW+V++T +
Sbjct: 133 ASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVGRIMDWFVKNTDQ 192

Query: 460 KTYEGKEDPG 489
           K Y  K+DPG
Sbjct: 193 KAYTRKDDPG 202



 Score = 84.6 bits (200), Expect = 5e-17
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = +2

Query: 449 NIQRRLMRARKTPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIRELAGCDLLTISP 622
           N  ++    +  PGVVSVT+I+NYYKK+ YKTQVM ASFRNT EI+ L GCDLLTISP
Sbjct: 189 NTDQKAYTRKDDPGVVSVTRIFNYYKKYDYKTQVMAASFRNTEEIKGLVGCDLLTISP 246


>AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8b protein.
          Length = 165

 Score = 84.6 bits (200), Expect = 5e-17
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = +2

Query: 449 NIQRRLMRARKTPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIRELAGCDLLTISP 622
           N  ++    +  PGVVSVT+I+NYYKK+ YKTQVM ASFRNT EI+ L GCDLLTISP
Sbjct: 35  NTDQKAYTRKDDPGVVSVTRIFNYYKKYDYKTQVMAASFRNTEEIKGLVGCDLLTISP 92



 Score = 67.3 bits (157), Expect = 8e-12
 Identities = 30/48 (62%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = +1

Query: 349 LTLLFSLY*AIACAEANVTLISPFVGRILDWYVEHT-KKTYEGKEDPG 489
           +TLLF+   A+ACAE+ VTLISPFVGRI+DW+V++T +K Y  K+DPG
Sbjct: 1   MTLLFNFEQAVACAESGVTLISPFVGRIMDWFVKNTDQKAYTRKDDPG 48


>AC084159-6|AAK39360.1|   97|Caenorhabditis elegans Hypothetical
           protein Y73B3A.2 protein.
          Length = 97

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +2

Query: 551 MGASFRNTGEIRELAGCDLLTISP 622
           M ASFRNT EI+ L GCDLLTISP
Sbjct: 1   MAASFRNTEEIKGLVGCDLLTISP 24


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 169 EVDARLSFDKDASIAKAIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEK 327
           E  A+L+ +KD  I K  + I L  E+ +KK++ + +L   +E     K L+K
Sbjct: 254 EASAQLN-EKDLVIEKITRKIELLQENNVKKDQRIYELEQCFESEDYCKILQK 305


>Z81493-7|CAE46664.1|  342|Caenorhabditis elegans Hypothetical
           protein F01D5.7b protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 514 VNFCHGNYSRGLPCPHKSSLYVQHTNPI 431
           V  CHG++ + +P  H  +LY    NP+
Sbjct: 262 VLICHGDHDQRIPMTHGMALYENLKNPV 289


>Z81493-6|CAB04038.1|  335|Caenorhabditis elegans Hypothetical
           protein F01D5.7a protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 514 VNFCHGNYSRGLPCPHKSSLYVQHTNPI 431
           V  CHG++ + +P  H  +LY    NP+
Sbjct: 255 VLICHGDHDQRIPMTHGMALYENLKNPV 282


>AF067214-8|AAC17008.1|   69|Caenorhabditis elegans Hypothetical
           protein F56C3.8 protein.
          Length = 69

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 260 FLIPCSANKLINLIAFAMLASLSNDNLASTSTDTRPGIIFNI 135
           F++    N ++ LI      SL +D L   +TD +PG++  +
Sbjct: 5   FIVTKMKNTVLLLILALFFISLRDDGLQMPNTDLKPGLLMQM 46


>Z93396-7|CAL49449.1|  196|Caenorhabditis elegans Hypothetical
           protein ZC15.10 protein.
          Length = 196

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +2

Query: 326 RSMESIVILHCCSLCTKLLPVLKQMLH*YHHLLV 427
           +  +  ++L   S CTKL+P +  + H   H  V
Sbjct: 3   QKQDQTIVLKATSSCTKLVPFIHSVAHSVQHFFV 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,306,297
Number of Sequences: 27780
Number of extensions: 328584
Number of successful extensions: 970
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)