Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0356
(515 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006405-1|AAH06405.1| 123|Homo sapiens thioredoxin-like 5 prot... 92 9e-19
AJ344101-1|CAC51435.1| 123|Homo sapiens putative 42-9-9 protein... 92 9e-19
X77584-1|CAA54687.1| 105|Homo sapiens ATL-derived factor/thiore... 29 7.3
X54539-1|CAA38410.1| 105|Homo sapiens thioredoxin protein. 29 7.3
CR407665-1|CAG28593.1| 105|Homo sapiens TXN protein. 29 7.3
BC054866-1|AAH54866.1| 105|Homo sapiens thioredoxin protein. 29 7.3
BC003377-1|AAH03377.1| 105|Homo sapiens thioredoxin protein. 29 7.3
AY004872-1|AAF87085.1| 105|Homo sapiens thioredoxin protein. 29 7.3
AL158158-1|CAI14066.1| 105|Homo sapiens thioredoxin protein. 29 7.3
AF548001-1|AAN33187.1| 105|Homo sapiens thioredoxin protein. 29 7.3
AF313911-1|AAG34699.1| 105|Homo sapiens thioredoxin protein. 29 7.3
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 29 9.7
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 29 9.7
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 29 9.7
J04026-1|AAA74596.1| 105|Homo sapiens thioredoxin protein. 29 9.7
BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein. 29 9.7
BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for IM... 29 9.7
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 29 9.7
AF276919-1|AAF86466.1| 105|Homo sapiens thioredoxin 1 protein. 29 9.7
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 29 9.7
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 29 9.7
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 29 9.7
>BC006405-1|AAH06405.1| 123|Homo sapiens thioredoxin-like 5
protein.
Length = 123
Score = 92.3 bits (219), Expect = 9e-19
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +2
Query: 233 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 409
V + GFEEF RA++ G +F YF+GSK G SWCPDCV+AEPVVR L + +
Sbjct: 7 VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63
Query: 410 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTL 514
+F+Y VG++ YWKD FR K+ +PTL
Sbjct: 64 CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTL 96
>AJ344101-1|CAC51435.1| 123|Homo sapiens putative 42-9-9 protein
protein.
Length = 123
Score = 92.3 bits (219), Expect = 9e-19
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +2
Query: 233 VDLKGFEEFSKYTRAIDSR-GPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 409
V + GFEEF RA++ G +F YF+GSK G SWCPDCV+AEPVVR L + +
Sbjct: 7 VSVSGFEEFH---RAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG 63
Query: 410 IIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTL 514
+F+Y VG++ YWKD FR K+ +PTL
Sbjct: 64 CVFIYCQVGEKPYWKDPNNDFR--KNLKVTAVPTL 96
>X77584-1|CAA54687.1| 105|Homo sapiens ATL-derived
factor/thioredoxin protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>X54539-1|CAA38410.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>CR407665-1|CAG28593.1| 105|Homo sapiens TXN protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>BC054866-1|AAH54866.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>BC003377-1|AAH03377.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>AY004872-1|AAF87085.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>AL158158-1|CAI14066.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>AF548001-1|AAN33187.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>AF313911-1|AAG34699.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C +P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMIKPFF-HSLSEKYSNVIFLEVDVDD 61
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 1794 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 1824
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 1766 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 1796
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 1795 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 1825
>J04026-1|AAA74596.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMINPFF-HSLSEKYSNVIFLEVDVDD 61
>BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein.
Length = 797
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 306 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 336
>BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for
IMAGE:3347229) protein.
Length = 797
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 306 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 336
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 1774 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 1804
>AF276919-1|AAF86466.1| 105|Homo sapiens thioredoxin 1 protein.
Length = 105
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 341 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGD 439
+WC C P H LSE ++IF+ VDV D
Sbjct: 30 TWCGPCKMINPFF-HSLSEKYSNVIFLEVDVDD 61
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 1752 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 1782
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 1795 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 1825
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 IHNLTVGNLYVFKKYIKIY*TNQVLHFPKWL 227
+ ++ VG + +Y IY NQV+HF +WL
Sbjct: 1806 LKSMVVGWVKEITQYHNIYADNQVMHFYRWL 1836
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,542,079
Number of Sequences: 237096
Number of extensions: 1368465
Number of successful extensions: 2349
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2349
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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