Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0354
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   5.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.5  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 444 LFDILRLLIRWVGFLKKLF 388
           +FD + L I WVG L  +F
Sbjct: 152 IFDNVWLFILWVGILSTIF 170


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 385  VKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQ 495
            V +LF+    +YK      E LR  +  + D+ RKI+
Sbjct: 1081 VNKLFKCMICTYKADNKENEQLRKIQESLRDLNRKIE 1117


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 385  VKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQ 495
            V +LF+    +YK      E LR  +  + D+ RKI+
Sbjct: 1081 VNKLFKCMICTYKADNKENEQLRKIQESLRDLNRKIE 1117


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 268 PNWEDPEYCKYYMV 309
           P + DP+ C+Y+ V
Sbjct: 184 PRYADPDDCQYFYV 197


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 12/45 (26%), Positives = 18/45 (40%)
 Frame = +1

Query: 433 YVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQAQTE 567
           Y  E +   K   N   +     K+R D +  +   P  TQ QT+
Sbjct: 184 YQNEEVTALKIKYNPFAKAFLDAKERPDSIYQREYSPTFTQQQTQ 228


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 329 RSCGQNFTM*YLQYSGSSQLGFLI 258
           R  G NFTM YL   G+ +   L+
Sbjct: 842 RQTGHNFTMEYLVSRGAPRGKLLV 865


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 250 WDRCSRCLPINSSRSCAAASTAIL 179
           W+R  R LPIN  +      T I+
Sbjct: 544 WERDGRQLPINRKQKVFINGTLII 567


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,044
Number of Sequences: 336
Number of extensions: 2395
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)