Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0354
(573 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing prote... 105 2e-23
At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing prote... 105 2e-23
At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing prote... 56 2e-08
At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing prote... 54 7e-08
At3g58320.1 68416.m06501 hypothetical protein 30 0.95
At3g44790.1 68416.m04823 meprin and TRAF homology domain-contain... 30 0.95
At2g17010.1 68415.m01961 mechanosensitive ion channel domain-con... 29 2.9
At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / he... 28 3.8
At5g01570.1 68418.m00072 hypothetical protein hypothetical prote... 28 5.1
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 28 5.1
At3g44800.1 68416.m04826 meprin and TRAF homology domain-contain... 27 6.7
At1g72320.3 68414.m08362 pumilio/Puf RNA-binding domain-containi... 27 8.9
At1g72320.2 68414.m08361 pumilio/Puf RNA-binding domain-containi... 27 8.9
At1g72320.1 68414.m08363 pumilio/Puf RNA-binding domain-containi... 27 8.9
>At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 105 bits (253), Expect = 2e-23
Identities = 47/110 (42%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Frame = +1
Query: 241 TDPNEK-IKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACPKVHDEEVKELFEKA--D 411
TD + K+ W+D E C +YMV+FCPHDLFVNT++DLGAC ++HD ++KE FE +
Sbjct: 19 TDEERRGFKEVKWDDREVCAFYMVRFCPHDLFVNTKSDLGACSRIHDPKLKESFENSPRH 78
Query: 412 PSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQAQ 561
SY ++ E +FC+ ++ND++RK+++G++RL +P PP A+
Sbjct: 79 DSY-VPKFEAELAQFCEKLVNDLDRKVRRGRERL-AQEVEPVPPPSLSAE 126
>At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 105 bits (253), Expect = 2e-23
Identities = 47/110 (42%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Frame = +1
Query: 241 TDPNEK-IKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACPKVHDEEVKELFEKA--D 411
TD + K+ W+D E C +YMV+FCPHDLFVNT++DLGAC ++HD ++KE FE +
Sbjct: 19 TDEERRGFKEVKWDDREVCAFYMVRFCPHDLFVNTKSDLGACSRIHDPKLKESFENSPRH 78
Query: 412 PSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQAQ 561
SY ++ E +FC+ ++ND++RK+++G++RL +P PP A+
Sbjct: 79 DSY-VPKFEAELAQFCEKLVNDLDRKVRRGRERL-AQEVEPVPPPSLSAE 126
>At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: LUC7 N_terminus
Length = 402
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +1
Query: 238 NTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACPKVHDEEVKELFEKADPS 417
N D E +K + D + C+ Y+ CPHDLF T+ D+G CPKVH ++++ + +A +
Sbjct: 17 NGDVQEVNRK--YYDRDVCRLYLSGLCPHDLFQLTKMDMGPCPKVHSLQLRKEYREA-RA 73
Query: 418 YKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSK 531
Y E +I + +RKI + +RL ++K
Sbjct: 74 KGVDNYDRELEDAIDRLIVECDRKIGRALKRLQEEDAK 111
>At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: Protein of unknown
function, DUF259
Length = 404
Score = 54.0 bits (124), Expect = 7e-08
Identities = 30/98 (30%), Positives = 51/98 (52%)
Frame = +1
Query: 238 NTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACPKVHDEEVKELFEKADPS 417
N D E +K + D + C+ Y+ CPH+LF T+ D+G CPKVH ++++ ++ A +
Sbjct: 17 NGDVTEVNRK--YYDRDVCRLYLSGLCPHELFQLTKMDMGPCPKVHSLQLRKEYKDA-KA 73
Query: 418 YKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSK 531
Y E +I + +RKI + RL ++K
Sbjct: 74 KGVDNYDRELEDAIDRLIVECDRKIGRALNRLQEEDAK 111
>At3g58320.1 68416.m06501 hypothetical protein
Length = 224
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 382 EVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRL 513
+V E + + S + + +EE L+ KHM+ D+E ++QK K+++
Sbjct: 167 DVSEKKKLGESSVVRLETMEEQLQKLKHMVLDLESQMQKEKEKV 210
>At3g44790.1 68416.m04823 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 324
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 379 EEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQR 510
EEVKE + + Q +EE L+ K +D+E +++K KQ+
Sbjct: 251 EEVKEKKMEEQIGKSRMQELEEELKIFKQKCSDIEAQLEKEKQK 294
>At2g17010.1 68415.m01961 mechanosensitive ion channel
domain-containing protein / MS ion channel
domain-containing protein contains Pfam profile PF00924:
Mechanosensitive ion channel
Length = 779
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 394 LFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRL-DLMNSKPE 537
L++K+ +Y +S + + + FC H+ +E KI KQR+ + +++KPE
Sbjct: 643 LWQKSINNYYRSPDMGDAIEFCVHITTPLE-KISVIKQRISNYIDNKPE 690
>At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / heat
shock transcription factor 1 (HSTF1) identical to heat
shock transcription factor 1 (HSF1) SP:P41151 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00447
HSF-type DNA-binding domain
Length = 495
Score = 28.3 bits (60), Expect = 3.8
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 274 WEDPEYCKYYMVKFCPHDLFVNTRADLGACPKVHDEEVKELFEKADPSYKKSQYVEE-FL 450
W+ PE+ + + K+ H+ F + L F K DP + ++ E FL
Sbjct: 82 WDPPEFSRDLLPKYFKHNNFSSFVRQLNTYG----------FRKVDPD--RWEFANEGFL 129
Query: 451 RFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQAQ 561
R KH++ + R+ K Q +S P+ ++Q Q
Sbjct: 130 RGQKHLLKKISRR--KSVQGHGSSSSNPQSQQLSQGQ 164
>At5g01570.1 68418.m00072 hypothetical protein hypothetical protein
T16O11.19 - Arabidopsis thaliana, EMBL:AC010871
Length = 157
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 325 DLFVNTRADLGACPKVHDEEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGK 504
D+ V T L A P DE+ KE+ E KK +E I D E +I++ +
Sbjct: 29 DVLVQTLEQLRAIPFSCDEDFKEIHESLQDLQKKLDVCKEKTDEANSEIAD-EEEIERLQ 87
Query: 505 QRLD 516
+ LD
Sbjct: 88 KELD 91
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 334 VNTRADLGACPKVHDEEVKELFEKADPSYKKSQ---YVEEFLRFCKHMINDVERK 489
+N ++ C K+ D+ V +F + DP+ K Q + + F + C N V RK
Sbjct: 127 LNELVEIMKCRKMLDQTVMTIFYEVDPTDVKKQTGDFGKVFKKTCMGKTNAVSRK 181
>At3g44800.1 68416.m04826 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein
Length = 564
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 379 EEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSK 531
EEVKE + + Q +EE L+ K +D+E ++K K+ L + K
Sbjct: 262 EEVKEKKIQEHIGKSRMQGLEEDLKVFKKKCSDIEALLEKEKEELKGLKQK 312
>At1g72320.3 68414.m08362 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile: PF00806 Pumilio-family
RNA binding domains (aka PUM-HD, Pumilio homology
domain) (5 copies)
Length = 731
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 465 MFTEP*KLFDILRLLIRWVGFLKKLFDFFIVDFRTSTKISSSINEQIMRTELYHVVFAVL 286
M + +L +I+ L++R KK+ F I T ++ I E + H+V +L
Sbjct: 291 MLKQDEQLLEIIPLILRCNSTNKKVEGFHI-----ETNVAKEILESMKDNSFSHLVEVIL 345
Query: 285 RIFPIRLFN 259
+ P L+N
Sbjct: 346 EVAPESLYN 354
>At1g72320.2 68414.m08361 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile: PF00806 Pumilio-family
RNA binding domains (aka PUM-HD, Pumilio homology
domain) (5 copies)
Length = 731
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 465 MFTEP*KLFDILRLLIRWVGFLKKLFDFFIVDFRTSTKISSSINEQIMRTELYHVVFAVL 286
M + +L +I+ L++R KK+ F I T ++ I E + H+V +L
Sbjct: 291 MLKQDEQLLEIIPLILRCNSTNKKVEGFHI-----ETNVAKEILESMKDNSFSHLVEVIL 345
Query: 285 RIFPIRLFN 259
+ P L+N
Sbjct: 346 EVAPESLYN 354
>At1g72320.1 68414.m08363 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile: PF00806 Pumilio-family
RNA binding domains (aka PUM-HD, Pumilio homology
domain) (5 copies)
Length = 753
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 465 MFTEP*KLFDILRLLIRWVGFLKKLFDFFIVDFRTSTKISSSINEQIMRTELYHVVFAVL 286
M + +L +I+ L++R KK+ F I T ++ I E + H+V +L
Sbjct: 313 MLKQDEQLLEIIPLILRCNSTNKKVEGFHI-----ETNVAKEILESMKDNSFSHLVEVIL 367
Query: 285 RIFPIRLFN 259
+ P L+N
Sbjct: 368 EVAPESLYN 376
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,125,367
Number of Sequences: 28952
Number of extensions: 203303
Number of successful extensions: 594
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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