Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0353
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 39 0.002
U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidan... 33 0.14
AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical... 30 1.3
AC006648-10|AAF39859.1| 305|Caenorhabditis elegans Btb and math... 30 1.3
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 28 5.3
L14433-1|AAA27979.1| 398|Caenorhabditis elegans Hypothetical pr... 28 5.3
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 7.0
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 27 7.0
Z77658-8|CAE17788.1| 79|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 9.2
U28412-3|AAC46594.2| 92|Caenorhabditis elegans Hypothetical pr... 27 9.2
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006642-7|AAF39828.1| 154|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/85 (28%), Positives = 33/85 (38%)
Frame = +3
Query: 282 TTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARIS 461
TT T + TT T P TT PT T + + + P T+P +
Sbjct: 225 TTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTT 284
Query: 462 TRTAKTISSRYVTGQTVTVSTRKTT 536
T T T +++ T T T KTT
Sbjct: 285 TPTTTTTTAKTTKSTTTTTKTTKTT 309
>U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidance
abnormal protein10 protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.14
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +3
Query: 261 KQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPE 440
K+ LLD + +KS ++ TT KK + K + +P+ AS P+
Sbjct: 11 KKTSLLDPS---PKKSSVIETTTKKTS---GIESKLLPNELPSTGTTGTSGVKNGASSPK 64
Query: 441 TSPARISTRTAKTISSRYVTGQTVTVST---RKTTYLRS 548
TSPA+ +T T ++ + T +ST RK T +S
Sbjct: 65 TSPAKTTTTTTTVVTQKVSNQPTAPISTLPPRKPTAQKS 103
>AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical
protein F46F5.11 protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +2
Query: 263 AGPTLGHYWKNGKEIENTEDYVEEVYDASQYHGQDG-LGAYAYGYQ-TPESAK-VENRVR 433
+G T+ N + N +Y+++ D Q + G + Y + ++ +PE++K +EN +
Sbjct: 303 SGLTVSFVPTNAVQFRNAHNYLKDFKDEKQVYEDSGRMIDYLHNWKCSPENSKQIENCI- 361
Query: 434 SGDVTGSYIYKDGKNDLIKVRYWSDRD 514
K NDL+KV+ W ++D
Sbjct: 362 ----------KQLVNDLVKVKLWGEQD 378
>AC006648-10|AAF39859.1| 305|Caenorhabditis elegans Btb and math
domain containingprotein 5 protein.
Length = 305
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = +2
Query: 272 TLGHYWKNGKEIEN-------TEDYVEEVYDASQYHGQDGLGAYAYGYQTPESA 412
TL H +KN ++E+ ED+ ++ S H ++ LG Y Y Y++ ESA
Sbjct: 9 TLRHIFKNVSQLEDGKYLYSPDEDHFNVDWNMSISHKKEKLGVYFYCYKSEESA 62
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 1/98 (1%)
Frame = +3
Query: 231 NTTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNL 410
+TTT L LL T T S T + P+TT T T + +
Sbjct: 287 STTTSSSTMLSSTTLLTTETETRESSSTGSTQTTTPSTEPSTTITTPMEQSSTVSSVQKT 346
Query: 411 RRSK-IASDPETSPARISTRTAKTISSRYVTGQTVTVS 521
R S+ S T P ST + T S T + T S
Sbjct: 347 RTSEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTS 384
>U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical
protein B0361.11 protein.
Length = 534
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 384 PTDTK-LPNLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVTVSTRKTTY 539
P++T L RRSK +S ++ ++ S R+ KT+SS V+ + TV+ Y
Sbjct: 480 PSETNDLSAYRRSKSSSSSVSALSKTSVRSKKTLSSESVSKKLDTVNFSDKEY 532
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 27.9 bits (59), Expect = 5.3
Identities = 25/92 (27%), Positives = 40/92 (43%)
Frame = +1
Query: 25 TSIELQKKKKHAAYXXXXXXXXXXXXXAETRHRRLPN*HRARRSTEVLKQPTIHRSSIRW 204
TS+E+Q+ + AY A R L N R++T+VL+ P+I + +
Sbjct: 254 TSLEVQQDQYILAYEEKIRTMSQEME-ALKRELELKNGPVQRKTTQVLEPPSIEQIQMVQ 312
Query: 205 PHRCLTIDQIQRPEVSHS*SRPHSWTLLEERK 300
P + T Q E SH S + E+R+
Sbjct: 313 PVQMTTSAAPQASESSHQYEMTTSTSSSEKRR 344
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
protein T20G5.5 protein.
Length = 1234
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 337 IRCVPIPRTRRSRCICLRIPNSRI 408
+RC+ R RRSR +C+ + R+
Sbjct: 104 VRCLKASRRRRSRRVCIEVEEDRV 127
>L14433-1|AAA27979.1| 398|Caenorhabditis elegans Hypothetical
protein C50C3.7 protein.
Length = 398
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/66 (27%), Positives = 25/66 (37%)
Frame = +2
Query: 203 GRTAVLPLIKYNDPRFRTVEAGPTLGHYWKNGKEIENTEDYVEEVYDASQYHGQDGLGAY 382
GR ++ IK D RF+ G GH G ++ Y D+ HG + G
Sbjct: 88 GRKQLIGQIKRIDYRFQRNTMGGLTGHKGSIGVRLQLASPYSIVFVDSHFIHGPENYGKR 147
Query: 383 AYGYQT 400
Y T
Sbjct: 148 VEQYHT 153
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 393 TKLPNLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVTVST 524
T+LP + + +P T+ A +ST TA+ + + + + ST
Sbjct: 906 TELPKISSTLSFGNPTTAAAPVSTATAEAVKTNVFGSNSASAST 949
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 27.5 bits (58), Expect = 7.0
Identities = 24/102 (23%), Positives = 40/102 (39%)
Frame = +2
Query: 128 FQIDIEPEEAQKYLNSPPFTDPQLGGRTAVLPLIKYNDPRFRTVEAGPTLGHYWKNGKEI 307
F +E EE ++ + PF +PQ ++ Y+D V +GH E+
Sbjct: 756 FYTTVEDEEGEEAEHENPFKNPQ---------ILMYDDDGDEVVVEEEIIGHEIDGASEL 806
Query: 308 ENTEDYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENRVR 433
+ +E EEV Y + Y Y E K+ + +R
Sbjct: 807 QGSELPDEEVI----YETYEDYPEYGGHYDLEEEHKMHHNMR 844
>Z77658-8|CAE17788.1| 79|Caenorhabditis elegans Hypothetical
protein F14D7.11 protein.
Length = 79
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
Frame = +3
Query: 57 CCVLC--LFSAWSQLC 98
CCV C LF+ W+QLC
Sbjct: 59 CCVSCCSLFTCWAQLC 74
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Frame = +3
Query: 234 TTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKL---P 404
TTT Q+ +T + +K TT K + +P TT V + T TK P
Sbjct: 368 TTTEVIRQVTTTTKKPSTTTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKP 427
Query: 405 NLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVT 515
S S ++ ST T K + R T + T
Sbjct: 428 TTSPSTTTSTTTSTTIPPSTTTRKPANPRRSTIMSAT 464
>U28412-3|AAC46594.2| 92|Caenorhabditis elegans Hypothetical
protein T19C3.3 protein.
Length = 92
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 414 RSKIASDPETSPARISTRTAKTISSRYVTGQ 506
+S+I D SP+R RT + +S VTG+
Sbjct: 50 KSQIFDDVPASPSRTPKRTVQVVSRNPVTGE 80
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.1 bits (57), Expect = 9.2
Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Frame = +3
Query: 234 TTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLR 413
TT +K P TT T + + TT+K P T T PT P
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTT--PTTMKSTPTTPTTPTTM 318
Query: 414 RSKIASDPETSPARISTRTAKTISSRYVTGQT--VTVSTRKTT 536
+S + P T ST T T + + T T +T K+T
Sbjct: 319 KS-TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKST 360
>AC006642-7|AAF39828.1| 154|Caenorhabditis elegans Hypothetical
protein F49H12.2 protein.
Length = 154
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 252 AQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTK--LPNLRRSKI 425
A+ + P + G E + R L+K R N +T +H P+DT+ + N +
Sbjct: 25 AEPTKKPKVVWPGEFENQLRKRNRNLEKIDERENNRLETPAIHTPSDTQSLISNEEDAHS 84
Query: 426 ASD--PETSP 449
SD PET P
Sbjct: 85 TSDLKPETPP 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,342,899
Number of Sequences: 27780
Number of extensions: 287622
Number of successful extensions: 965
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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