Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0352
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    28   0.067
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    27   0.088
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.36 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 27.9 bits (59), Expect = 0.067
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +1

Query: 439  SVPPSRRSTWPRAAWSRRPCTRSAAPTTSSCSHTPTRRIYYRKP 570
            SV P      P    +  PC  SA+P +S  S TP      RKP
Sbjct: 912  SVSPLTSPRQPAETHAGSPCRNSASPASSDRSGTPRSTNGDRKP 955


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 27.5 bits (58), Expect = 0.088
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 439 SVPPSRRSTWPRAAWSRRPCTRSA 510
           SVP    ST PR  W+R P T SA
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPSA 421


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 416 GAARVVPRPSRHRADQPGLVLRGPAGPAR 502
           GAA  VP+  R RA +PG+V     G AR
Sbjct: 31  GAAVQVPQGGRRRAARPGVVTTPRWGCAR 59


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 436 ASVPPSRRSTWPRAAWSRRPCTRSAAPTTSSCSHTPTRRIY 558
           A  P S  S+ P    S    T S+    +SCS  PT   Y
Sbjct: 74  APSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASY 114


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 493 AGGTTQHEARLICAMAGRTR 434
           +GGTT    R +CA +  TR
Sbjct: 910 SGGTTARVVRCVCAGSTGTR 929


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 37  WRQDLHQ*RQHGCIEGSHL 93
           W+  L + RQ G +EG+++
Sbjct: 447 WKDILEKPRQRGTLEGNNM 465


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,473
Number of Sequences: 336
Number of extensions: 2706
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)