Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0351
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   8.4  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 289 SSLFGPVSSACGDLLADWSSLGAMASELVTLVVLLMCPAYFIFV 158
           + L  P+  +C DL    S L    +    L++LLM  ++FIF+
Sbjct: 206 AELVMPLCKSC-DLHHRLSKLIKQLNATYGLILLLMFTSHFIFI 248


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 371 GNGQSSGSHRHFLRSQGRQESV 306
           G    S  HRH L+   R +SV
Sbjct: 325 GGALVSAKHRHLLKGIERADSV 346


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 320 DPDSSGNADGYPR 358
           DPD++GN   Y R
Sbjct: 383 DPDTAGNKASYAR 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,450
Number of Sequences: 336
Number of extensions: 2683
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)