Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0351
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 32 0.30
04_03_0737 - 19152942-19154930 31 0.53
01_06_1709 + 39337720-39337785,39338103-39338310,39338705-39339345 31 0.53
06_02_0185 + 12774608-12775970,12776058-12776983 31 0.70
05_07_0367 - 29700855-29700920,29701092-29701149,29701446-297015... 30 0.93
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 30 1.2
04_01_0390 - 5133416-5133472,5134153-5134234,5134368-5134426 30 1.2
07_01_0975 + 8223269-8224354 28 3.7
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 28 3.7
06_01_0275 + 2029542-2029689,2029777-2030295,2030657-2030754,203... 28 5.0
01_05_0024 - 17262504-17263308,17264251-17264399,17264879-172649... 28 5.0
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 27 6.5
05_03_0467 - 14366969-14367742,14368335-14368754,14370339-143704... 27 6.5
01_06_0640 + 30779457-30779623,30779707-30779828,30779959-307800... 27 6.5
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 27 8.7
10_08_0172 - 15406961-15407488,15408068-15408187,15408308-154085... 27 8.7
08_02_0127 + 12840738-12840913,12841475-12841635,12842123-128422... 27 8.7
04_04_1256 + 32124826-32124946,32125388-32125554,32125731-321259... 27 8.7
04_04_1252 + 32093522-32093642,32093912-32094078,32094832-320950... 27 8.7
03_05_0892 + 28563151-28563669,28563977-28564035,28564170-285642... 27 8.7
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 31.9 bits (69), Expect = 0.30
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +3
Query: 99 IEVLQKCSRQRKA*KSLCRRTKMKYAGHISKTTSVTNSDAMAPRLDQSASKSPQAEETGP 278
I VL K +++R+ + R+ + H+ K T++D+M PR ++A P P
Sbjct: 54 IPVLSKAAKRRRRAAAKARQAASQE--HVIKVREATSNDSMPPRFTRAA---PAMTRAAP 108
Query: 279 KRLLKLQKYHRFLSTLTPQEMPM 347
+ + Y RF T T E P+
Sbjct: 109 FKTRSYEAYPRFRRT-TLGEWPV 130
>04_03_0737 - 19152942-19154930
Length = 662
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 169 STPGTSARQLASPILMPWPRGWTSRRASHHRLRKPDRRDC*SCKNITDSCRP 324
+TP + A A+ P PRG RA HRLR C ++ S RP
Sbjct: 3 TTPASLAAAAAAATAAPEPRGIRPPRAPVHRLRLRHHATRVGCSTVSVSTRP 54
>01_06_1709 + 39337720-39337785,39338103-39338310,39338705-39339345
Length = 304
Score = 31.1 bits (67), Expect = 0.53
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 384 GLVPWKRPVLG*PSAFPEESGSTGICDIFAASAVSSVRFPQPVVTC 247
GLV R ++ P AFP SGS G D A + ++ + P C
Sbjct: 170 GLVATLRNIVRRPLAFPSASGSCGPADADACALIARLLAKDPAARC 215
>06_02_0185 + 12774608-12775970,12776058-12776983
Length = 762
Score = 30.7 bits (66), Expect = 0.70
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 296 AKISQ--IPVDPDSSGNADGY--PRTGRFQGTSPGSSWLSFRTSSGDLTETGKHI 448
A ISQ + + PDSS +ADGY +TGR ++P + W G+ G ++
Sbjct: 62 ASISQGALQITPDSSNSADGYLVNQTGRVFFSTPFTLWSPAAGGGGNGNGNGTYV 116
>05_07_0367 -
29700855-29700920,29701092-29701149,29701446-29701503,
29701800-29701857,29702154-29702211,29702508-29702551,
29702840-29703022,29703192-29703249,29703545-29703602,
29703897-29703954,29704250-29704307,29704956-29705013,
29705310-29705367,29705664-29705721,29706348-29706398,
29706695-29706752,29707049-29707106,29707403-29707459,
29707754-29707810,29708085-29708135,29708431-29708507,
29708785-29708842,29709139-29709195,29709490-29709546,
29709821-29709893,29710167-29710224,29710521-29710578,
29710875-29710931,29711558-29711608,29711904-29711980,
29712258-29712315,29712612-29712669,29712966-29713016,
29713667-29713717,29714014-29714057,29714368-29714444,
29714722-29714779,29715076-29715126,29715423-29715480,
29715776-29715833,29716130-29716187,29716484-29716534,
29716831-29716907,29717185-29717242,29717539-29717589,
29718240-29718316,29718594-29718651,29718947-29719004,
29719301-29719351,29719648-29719705,29723277-29723334,
29723631-29723681,29724331-29724388,29724684-29724741,
29725038-29725088,29725385-29725442,29725738-29725814,
29726092-29726148,29726444-29726501,29726798-29726848,
29727070-29727075
Length = 1209
Score = 30.3 bits (65), Expect = 0.93
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 RQLASPILMPWPRGWTSRRASHHRLRKPDRRDC*SCKNITDSCRP*LLRK-CRWLPEDWP 366
R+ A WP WT R ++ HR+ +R ++ SC P +R+ WP
Sbjct: 550 RRFAETTAASWPMLWTLRYSTFHRI---NRSFVAYATSLKTSCGPSDIRRFAETTAASWP 606
Query: 367 FPRDQSR 387
P D R
Sbjct: 607 MPSDIRR 613
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 220 WPRGWTSRRASHHRLRKPDRRDC*SCKNITDSCRP*LLRK-CRWLPEDWPFPRDQSR 387
WP WT R ++ HR+ +R ++ SC P +R+ WP P D R
Sbjct: 742 WPMLWTLRYSTFHRI---NRSFVAYATSLKTSCGPSDIRRFAETTAASWPMPSDIRR 795
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 458 EASKWLAKLLQYNVPNG 508
EA +WLA+++ YNVP G
Sbjct: 80 EARRWLAQMIDYNVPGG 96
>04_01_0390 - 5133416-5133472,5134153-5134234,5134368-5134426
Length = 65
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -3
Query: 287 QSLRSGFLSLW*LA--RRLV-QPRGHGIRIGDASC 192
Q F + W L R LV QPRG GIRI D+SC
Sbjct: 4 QKFNVNFSTSWYLTVPRSLVGQPRGQGIRIYDSSC 38
>07_01_0975 + 8223269-8224354
Length = 361
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/84 (23%), Positives = 34/84 (40%)
Frame = +2
Query: 221 GPEAGPVGEQVTTG*GNRTEETAEAAKISQIPVDPDSSGNADGYPRTGRFQGTSPGSSWL 400
GP +GP +G + A+ ++ P ++G A+G G +G SP S
Sbjct: 284 GPASGPSSYGAASGPAEGPSSSGAASGPAEGPSPSGAAGPAEGPSSYGSTEGPSPSPS-- 341
Query: 401 SFRTSSGDLTETGKHIDVPEASKW 472
SSG G P++ ++
Sbjct: 342 ----SSGSADAPGPGASAPDSEEY 361
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 458 EASKWLAKLLQYNVPNG 508
E +W+AK++ YNVP G
Sbjct: 95 ETRQWVAKMMDYNVPGG 111
>06_01_0275 +
2029542-2029689,2029777-2030295,2030657-2030754,
2031718-2032028,2032560-2032631,2032729-2033398
Length = 605
Score = 27.9 bits (59), Expect = 5.0
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -3
Query: 77 SCLKVSLKKII*WYLIQ*TLVPNSC 3
S K+ +K+++ W+++ T +P+SC
Sbjct: 275 SLFKIMIKRLVRWHVLPKTCIPDSC 299
>01_05_0024 -
17262504-17263308,17264251-17264399,17264879-17264978,
17265829-17265953,17267565-17267743,17269648-17270698
Length = 802
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 219 MAPRLDQSASKSPQAEETGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKGP 380
M P +D SA+ AEE P+ L+ +K L+ P P+ + + GP
Sbjct: 273 MKPAVDGSAAPMHVAEEQPPQTALEKEKAIEQLAANLPPSKPLIRKPPKAAPGP 326
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 286 SLFGPVSSACGDLLADWSSLGAMASELVTLVVLLM 182
+LFG + S +L+ +WS + L+TLV +++
Sbjct: 183 ALFGLIGSMLSELITNWSLYANKVAALLTLVFVIV 217
>05_03_0467 -
14366969-14367742,14368335-14368754,14370339-14370496,
14370571-14370664,14371536-14371649,14371794-14371985,
14372095-14372176,14372280-14372471,14372773-14373371
Length = 874
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/70 (22%), Positives = 29/70 (41%)
Frame = +2
Query: 272 RTEETAEAAKISQIPVDPDSSGNADGYPRTGRFQGTSPGSSWLSFRTSSGDLTETGKHID 451
+ + E K++ +P SS AD Y + + + W F ++T + H+D
Sbjct: 543 KARDLFETIKVN-LPSSNHSSHKADAYTYSSMLEAAASAQQWEYFENVYREMTLSQYHLD 601
Query: 452 VPEASKWLAK 481
+ S L K
Sbjct: 602 QSKYSWMLIK 611
>01_06_0640 +
30779457-30779623,30779707-30779828,30779959-30780014,
30780147-30780254
Length = 150
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 339 MPMATRGL-AVSKGPVP---GVHGCLSGHRQGISLRLASTLMFRKPANGWLS 482
+P +TR A+S+ PV G HG + H S L S L + + GWLS
Sbjct: 44 LPRSTRRRPAISRVPVEALGGAHGLMPLHSATASALLTSMLGLKPGSWGWLS 95
>10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 346 WLPEDWPFPRDQSREFMAV 402
WL E +PFPRD +AV
Sbjct: 2494 WLDERYPFPRDVGEALLAV 2512
>10_08_0172 -
15406961-15407488,15408068-15408187,15408308-15408568,
15408684-15409112
Length = 445
Score = 27.1 bits (57), Expect = 8.7
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 186 SKTTSVTNSDAMAPRLDQSASKSPQ--AEETGPKRLLKL-QKYHRFLSTLTPQEMPMATR 356
S +++ T+ DA + S + S + AE G R L L Q+ L T QE+ ATR
Sbjct: 40 SNSSTSTDRDARRSGSECSLNVSSEISAESFGRYRQLSLPQRASNNLRIFTFQELKSATR 99
Query: 357 GLAVSKGPVPGVHGCL 404
G + S G GC+
Sbjct: 100 GFSRSLVLGEGGFGCV 115
>08_02_0127 +
12840738-12840913,12841475-12841635,12842123-12842202,
12842435-12842550,12842570-12842705,12842738-12842872
Length = 267
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -1
Query: 280 FGPVSSACGDLLADWSSLGAMASELVTLVVLLMCPAYFIFVRLHKLF*AFLCREHFCSTS 101
FGP C DW S A+ + + +L+ F H+ F A LCR F ++
Sbjct: 112 FGPYLQVCPCCHCDWDSTDALLGQEQDMTILMDEEVLEFFE--HR-FLALLCRVGFSTSE 168
Query: 100 IRY 92
+ Y
Sbjct: 169 MVY 171
>04_04_1256 +
32124826-32124946,32125388-32125554,32125731-32125934,
32126063-32126222,32126379-32126592,32126707-32126854
Length = 337
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -2
Query: 486 NSLANHLLASGTSMCLPVSVRSPDDVRKDSHELPGL 379
++L LL G ++ +VR+PDD+RK+SH L GL
Sbjct: 20 SALIKMLLQKGYAV--NTTVRNPDDMRKNSH-LKGL 52
>04_04_1252 +
32093522-32093642,32093912-32094078,32094832-32095050,
32095143-32095302,32095696-32095825,32095998-32096151
Length = 316
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 486 NSLANHLLASGTSMCLPVSVRSPDDVRKDSH--ELPGLVPWK 367
++L LL G ++ +VR+PDD+ K+SH EL L P K
Sbjct: 20 SALIKMLLQKGYAV--KTTVRNPDDMEKNSHFKELQALGPLK 59
>03_05_0892 +
28563151-28563669,28563977-28564035,28564170-28564295,
28564460-28564595,28564901-28565209
Length = 382
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 286 SLFGPVSSACGDLLADWSSLGAMASELVTLVVLLMCPAY 170
S F PV AC LA W A + T +CP Y
Sbjct: 40 SSFAPVPRACRSALAAWQQGHDEAEQAPTPAPSRLCPPY 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,382,890
Number of Sequences: 37544
Number of extensions: 316131
Number of successful extensions: 1065
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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