Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0351
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    26   0.64 
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   7.9  

>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +3

Query: 195 TSVTNSDAMAPRLDQSASKSPQAEETGPKRLLKLQKYHRFLSTLTP-----QEMPMATRG 359
           TS   +D   P+  +        ++ GP  L +LQ+  +  S LTP     + +P    G
Sbjct: 31  TSFDGNDGFGPQTRKGRRPVADDQQPGPSGLQRLQQQQQQPSRLTPVREAVENIPSPRNG 90

Query: 360 LAVSKGPV 383
             +++G +
Sbjct: 91  PNINEGSI 98


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 320 DPDSSGNADGYPRTGRFQGTSPGS-SWLSFRTS 415
           DPD++GN  GY +     G +    S+  FR S
Sbjct: 391 DPDTAGNKAGYVKAKNLGGIAINDLSYDDFRGS 423


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,543
Number of Sequences: 2352
Number of extensions: 11288
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)