Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0351
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    23   2.4  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    23   2.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   2.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   5.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.3  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   9.7  

>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 214 MPWPRGWTSRR 246
           MPW +GWT  R
Sbjct: 135 MPWFKGWTVER 145


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 214 MPWPRGWTSRR 246
           MPW +GWT  R
Sbjct: 151 MPWFKGWTVER 161


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 214 MPWPRGWTSRR 246
           MPW +GWT  R
Sbjct: 208 MPWFKGWTVER 218


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 150 INFSKLFFVENIFVVLQY 97
           INF + FF+E +  VL +
Sbjct: 10  INFDRFFFIEGMTNVLDF 27


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 253 DLLADWSSLGAMASELVT 200
           D+ AD+ SLG +  EL+T
Sbjct: 543 DISADYWSLGVLMFELLT 560


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -1

Query: 271 VSSACGDLLADWSSLGAMASELVTLVVLLMCPAYFIFVRLHKL 143
           ++ +C D +A W+ LG   +    L+   + P YF  + L  L
Sbjct: 431 LTMSCSDKIARWNVLGVQGA----LLSYFIEPIYFHSIVLGSL 469


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 467 CWLPEHQCA 441
           C +PE+QCA
Sbjct: 53  CMVPEYQCA 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,190
Number of Sequences: 438
Number of extensions: 3190
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)