Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0349
         (482 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.069
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 27.5 bits (58), Expect = 0.069
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 474 VVKSFEPNDG*RQ-GGKVQSQICRSF 400
           +VKSF+  D   Q GGKV++ IC++F
Sbjct: 504 LVKSFDAIDSKLQTGGKVETSICKNF 529


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +3

Query: 330 IEPSDHQHLDAEMQGNMRLFRAQRNFYISGF 422
           IE +DH+ +D     ++++   +  F  +GF
Sbjct: 670 IETNDHEIIDKIEMFSLQILNERAGFSAAGF 700


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 391 VHRETSTYLALHFSSLSSS 447
           VH E+S  L L FS  SSS
Sbjct: 218 VHSESSKVLPLLFSVSSSS 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,720
Number of Sequences: 336
Number of extensions: 2131
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)