Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0349
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   5.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   5.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   5.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 352 CWWSDGSIFEYFCISRIASSR 290
           C WS+G + +   ++R A SR
Sbjct: 389 CTWSEGDLEKCKALTRAAYSR 409


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 352 CWWSDGSIFEYFCISRIASSR 290
           C WS+G + +   ++R A SR
Sbjct: 389 CTWSEGDLEKCKALTRAAYSR 409


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 352 CWWSDGSIFEYFCISRIASSR 290
           C WS+G + +   ++R A SR
Sbjct: 389 CTWSEGDLEKCKALTRAAYSR 409


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 82  RY*LYNAANDSGRTTNYD 29
           RY L   +ND G+T  +D
Sbjct: 271 RYFLERMSNDLGKTAEFD 288


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 82  RY*LYNAANDSGRTTNYD 29
           RY L   +ND G+T  +D
Sbjct: 271 RYFLERMSNDLGKTAEFD 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,266
Number of Sequences: 438
Number of extensions: 2115
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)