Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0346
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57436| Best HMM Match : SCP (HMM E-Value=3.9e-13) 33 0.15
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_43247| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 32 0.45
SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_16670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 1.8
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 2.4
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 29 2.4
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 2.4
SB_13234| Best HMM Match : PSI (HMM E-Value=4.4) 29 4.2
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 4.2
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 29 4.2
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_58220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 28 5.5
SB_48665| Best HMM Match : CM1 (HMM E-Value=2.5) 28 5.5
SB_58411| Best HMM Match : SKIP_SNW (HMM E-Value=3.2) 28 5.5
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 28 5.5
SB_12214| Best HMM Match : SAP (HMM E-Value=0.0036) 28 5.5
SB_8469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032) 27 9.7
SB_54680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_34090| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_16299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_57436| Best HMM Match : SCP (HMM E-Value=3.9e-13)
Length = 265
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = +1
Query: 211 LAAPLSYH*S-----NTTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDK 375
LA SYH S + T+R + K L +TTG E S T+L + T P TT+
Sbjct: 10 LADGCSYHRSFSSSPDETSRNTSLPKTTSLPETTGLPETTSLPETTSLPETTSLPETTNL 69
Query: 376 TV*VHMPTDTKLPNLRR-SKIASDPETS 456
+P T LP + A+ PET+
Sbjct: 70 PETTSLPETTNLPETTSPPETATPPETT 97
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARI 468
+TTG E S T +++ T P TT + +P T P + S ET+
Sbjct: 2902 ETTGAPETTSAPKTTAVQEATASPETTSEPETTALPKTTAAP-----ETTSPTETTAVPG 2956
Query: 469 STRTAKTISSRYVTGQTVTVSTRKTTYL 552
+T KT +S T + T +TT++
Sbjct: 2957 TTAAPKTTASPETTAKPDTTGAAETTFV 2984
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARI 468
+TTG E S T + + T P TT P T P + S PET+ A
Sbjct: 3040 ETTGAPETTSAPKTTAVPEATAAPETTSAPETTAAPETTSAP-----ETTSVPETTSAPE 3094
Query: 469 STRTAKTISSRYVTGQTVTVSTRKTTYL 552
+T +T +S T + T +TT++
Sbjct: 3095 TTALPETTASPETTAKPDTTGAPETTFV 3122
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLP-NLRRSKIASDPETSPAR 465
+TT E S T L + T P TT K P T +P + + + P T+
Sbjct: 3082 ETTSVPETTSAPETTALPETTASPETTAKPDTTGAPETTFVPETIAAPETTTVPGTTAVP 3141
Query: 466 ISTRTAKTISSRYVTGQTVTVSTRKTT 546
+T ++T+++ T T + +TT
Sbjct: 3142 GTTAVSETVATPETTAAPETTAVPETT 3168
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARI 468
+TTG E S T + + T P TT P T P + S PET+ A
Sbjct: 1885 ETTGAPETTSAPKTTAVPEATAAPETTSAPETTAAPETTSAP-----ETTSVPETTSAPE 1939
Query: 469 STRTAKTISSRYVTGQTVTVSTRKTTYL 552
+T +T +S T + T +TT++
Sbjct: 1940 TTALPETTASPETTAKPDTTGAPETTFV 1967
Score = 32.7 bits (71), Expect = 0.26
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +1
Query: 277 APLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRR-SKIASDPET 453
A + +TT E S T L K T P TT + P T P K + PET
Sbjct: 2127 AAVPETTSVPETTSAPENTALPKTTALPETTAAPETIAKPETTAPPETTALPKTTTLPET 2186
Query: 454 SPARISTRTAKTISSRYVTGQTVTVSTRKTTYLRSS 561
+ A +T +T + T + T + R TT + S
Sbjct: 2187 TAAPETTAKPETTGAPETTSASDTTAVRGTTAVPES 2222
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRR-SKIASDPETSPAR 465
+TTG E S T +++ T P TT + +P T P ++ + P T+ A
Sbjct: 2359 ETTGAPETTSAPKTTAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTTAAP 2418
Query: 466 ISTRTAKTISSRYVTGQTVTVSTRKTT 546
+T + +T + TG T + TT
Sbjct: 2419 KTTASPETTAKPDTTGAAETTAVPVTT 2445
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/72 (33%), Positives = 29/72 (40%)
Frame = +1
Query: 331 TTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYVT 510
T + K T P TT P T LP KI + PET+ +T +T S T
Sbjct: 2896 TAVPKTTAAPETTPLPKTTAAPETTTLP-----KITAAPETTAVPKTTAAPETTSVPKTT 2950
Query: 511 GQTVTVSTRKTT 546
T S KTT
Sbjct: 2951 AAPETTSVPKTT 2962
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 292 TTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRS-KIASDPETSPARI 468
TT E + TTL K T+ P TT P T +P + + S P+T+ A
Sbjct: 2703 TTAAPEATAVPETTTLPKTTVAPETTTLPKTTAAPETTAVPKTTAAPETTSVPKTTAAPG 2762
Query: 469 STRTAKTISSRYVTGQTVTVSTRKTT 546
++ KT + T T + +TT
Sbjct: 2763 TSTVPKTTVAAETTSVPKTTAIMETT 2788
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +1
Query: 331 TTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYVT 510
T++ K T P TT P T LP K + PET+P +T +T + T
Sbjct: 2944 TSVPKTTAAPETTSVPKTTAAPETTPLP-----KTTAAPETTPLPKTTAAPETTTLPKTT 2998
Query: 511 GQTVTVSTRKTT 546
T + KTT
Sbjct: 2999 AAPETTTLPKTT 3010
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLP-NLRRSKIASDPETSPAR 465
+TT E S T L + T P TT K P T +P + + + P T+
Sbjct: 1927 ETTSVPETTSAPETTALPETTASPETTAKPDTTGAPETTFVPETIAAPETTTVPGTTAVP 1986
Query: 466 ISTRTAKTISSRYVTGQTVTVSTRKTT 546
+T ++T+++ T T + +TT
Sbjct: 1987 GTTAVSETVATPETTAAPETTAVPETT 2013
Score = 27.9 bits (59), Expect = 7.3
Identities = 32/116 (27%), Positives = 44/116 (37%)
Frame = +1
Query: 199 ILN*LAAPLSYH*SNTTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKT 378
I+ A P+S TT + AP +TT + + T + K T P TT
Sbjct: 2784 IMETTAVPMSNAGPETTAA--PETTAAP--ETTAVPKTTAAPETTAVPKTTAAPETTSVP 2839
Query: 379 V*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVTVSTRKTT 546
P T +P K + PET+ +T +T S T T S KTT
Sbjct: 2840 KTTAAPETTSVP-----KTTAAPETTTLPKTTAAPETTSVPKTTAAPGTTSVPKTT 2890
>SB_43247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 204 QLAGRTAVLPLIKYNDPRFRTVEAGPTLGHYWKNGKEIENTEDYVEEVY 350
QLA + + ++ ++ GP LG + KN + N ED V +VY
Sbjct: 281 QLANISQFMMMLSIQTDEMARLKGGPLLGEFVKNMRGFANAEDGVRKVY 329
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 31.9 bits (69), Expect = 0.45
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Frame = +1
Query: 238 SNTTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTT----DKTV*VHMPTDT 405
S TR F + Q P D T T + TT+ YT +TT T+ ++ T T
Sbjct: 365 SGEETRKF-ECVQVPPTDFTTITTITNYTTTTTITNYTTTVSTTITNYTTTITINNYTTT 423
Query: 406 KLPNLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVTVSTRKTT 546
+ + T +T TIS+ Y T T+T++T TT
Sbjct: 424 VNTTITTNYTTIVTITITTNYTTIVTITISTNYTTIVTITITTNYTT 470
>SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 355 RPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKTISS 498
RP+ T T H P D + P + D +TS R S+ + T+ S
Sbjct: 544 RPSQTPPTSLKHFPGDERTPPTSLKHVPGDEQTSQVRFSSEPSSTLRS 591
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 283 LLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLP-NLRRSKIASDPETSP 459
+++TT TE + I TT K T P T +T T T+ P + + ++ T+
Sbjct: 12 IIETTTTTEEPTTITETTTTKTTEEPTTITETT-----TTTEEPTTITETTTTTEEPTTI 66
Query: 460 ARISTRTAKTISSRYVTGQTVTVSTR 537
I+T T + ++ +T T R
Sbjct: 67 TEITTTTEEPTTTTTTAAETPTTIMR 92
>SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 324 TEDYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENR 437
TE + + S YHGQDGLG A G + P+ ++++
Sbjct: 151 TEGLTGDFVELSAYHGQDGLGD-AQGLREPDRTPLKDK 187
>SB_16670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 149 VNLEDVDAGFRRRRHNCDPRREQTQYAACFFFFFLIRSMYHSL 21
VN E + GFRR + + R+ TQY F+F+ S L
Sbjct: 47 VNTESCEQGFRRLNNYFEVTRKMTQYKRNILFWFVNNSFNRDL 89
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARI 468
DTT E + + T + T P+TT +P T P + + P+T+ A
Sbjct: 890 DTTAAPETTAALETTAAPETTAAPDTTAAPDTTAVPETTAAP-----ETTATPDTTAATE 944
Query: 469 STRTAKTISSRYVTGQTVTVSTRKTT 546
+T +T + T T ST +TT
Sbjct: 945 TTAAPETTAVPETTAAPETTSTPETT 970
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRS-KIASDPETSPAR 465
+TT E + T + T+ P TT P T P + + PET+ A
Sbjct: 494 ETTKEPETTAAPDTTAAPETTVAPETTIAPETTATPETTAAPETTVAPETTMTPETTAAP 553
Query: 466 ISTRTAKTISSRYVTGQTVTVSTRKTT 546
+T +T ++ T + T + KTT
Sbjct: 554 ETTTAPETTAASETTAASETTAAPKTT 580
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +1
Query: 289 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIAS-DPETSPAR 465
+TT E T + TM P TT P T P + + + PET+ A
Sbjct: 514 ETTAAPETTMAPETTAAPETTMAPETTIAPEATVAPETTMAPETTAAPVTTMAPETTAAL 573
Query: 466 ISTRTAKTISSRYVTGQTVTVSTRKTT 546
+T +T ++R T T KTT
Sbjct: 574 ETTMAPETTAARETTVAPETTLAPKTT 600
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/47 (42%), Positives = 21/47 (44%)
Frame = +1
Query: 349 TMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKT 489
TM P T P+ T P S I PETSPA IS T KT
Sbjct: 3087 TMAPEATVVPKTTVGPSTTISPKTETS-ITETPETSPATISISTEKT 3132
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = +1
Query: 286 LDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLR-RSKIASDPETSPA 462
L+TT E T + T+ P TTD P T P + S PET+ A
Sbjct: 1370 LETTATLETTMVPETTASSETTVAPETTDAPATTLAPETTAAPETTWAPETTSAPETTVA 1429
Query: 463 RISTRTAKTISSRYVTGQTVTVSTRKTT 546
T +T ++ +T T + TT
Sbjct: 1430 PEITAATETTAAPDITVAPKTTAAPVTT 1457
Score = 27.9 bits (59), Expect = 7.3
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 331 TTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRS-KIASDPETSPARISTRTAKTISSRYV 507
T+ TM P TT V P T P + + PET+ A +T +T ++
Sbjct: 3316 TSAPATTMAPETTAAPVTTMAPETTAAPATTAALETTMVPETTAASETTVAPETTDAQAT 3375
Query: 508 TGQTVTVSTRKTT 546
T T + +KTT
Sbjct: 3376 TLAPETTAAQKTT 3388
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 331 TTLKKYTMRPNTTDKTV*VHMP-TDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYV 507
T + T+ P TTD P T T L +K PET+PA +T ++ ++
Sbjct: 217 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 276
Query: 508 TGQTVTVSTRKTT 546
T T +++TT
Sbjct: 277 TVAPETTVSQETT 289
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 394 PTDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVT 525
PT T L+ ++ +S P TSPA T T + +T TVT
Sbjct: 773 PTATTTSTLQTTEPSSTPSTSPALTVTMTTVIATDSSITPTTVT 816
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 331 TTLKKYTMRPNTTDKTV*VHMP-TDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYV 507
T + T+ P TTD P T T L +K PET+PA +T ++ ++
Sbjct: 2279 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 2338
Query: 508 TGQTVTVSTRKTT 546
T T +++TT
Sbjct: 2339 TVAPETTVSQETT 2351
>SB_13234| Best HMM Match : PSI (HMM E-Value=4.4)
Length = 240
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 KKKEETCCVLCLFSPWVA-VVSASPKPGIDVFQIDIEPEEAQKYLNSPPFTD 200
KK T C CL +PW V++ P+P D PE K ++S P TD
Sbjct: 112 KKTLGTSCEYCLKNPWSGPVMTCIPRP---FPSADDLPEFHYKNVHSTPLTD 160
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 385 VHMPTDTKLPNLRRSKIAS-DPETSPARISTRTAKTISSRYVTGQTVTVSTRKTTYLRSS 561
VH P+L + ++ P T+ I R+ + SR GQ T+ST KTT +S
Sbjct: 1701 VHSIPSPSRPSLNIAPSSTLTPSTAGHTIDIRSTNRVHSRAQEGQIPTLSTLKTTSTSTS 1760
Query: 562 *NK 570
K
Sbjct: 1761 TTK 1763
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Frame = +1
Query: 247 TTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRR 426
TT G +AP TTG T T+ P TT PT T P+
Sbjct: 315 TTTGAPSTTRAP--PTTGAVTTTGAPATTGAPATTVAPTTTGAPTTTGAPTTTGAPSTTE 372
Query: 427 SKIASD-PETSPARISTRTAKTISSRYVTGQTVT 525
+ ++ P T+ A +T T + TG T
Sbjct: 373 APSTTEAPSTTEAPSTTEVPTTSAVPTTTGAPTT 406
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -1
Query: 499 LMRSFLPSL*IYEPVTSPDLTRFSTF----ADSGVWYP*AYAPRPSCPWYWD 356
L R+FLP +Y + +PDLT+ T D + Y + C WYWD
Sbjct: 1550 LRRTFLPYQGLYYVLITPDLTKQQTLLWRSGDLNISYGLGFY-ESGC-WYWD 1599
>SB_58220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 KKKEETCCVLCLFSPWVA-VVSASPKPGIDVFQIDIEPEEAQKYLNSPPFTD 200
KK T C CL +PW V++ P+P D PE K ++S P TD
Sbjct: 84 KKTLGTSCEYCLKNPWSGPVMTRIPRP---FPSADDLPEFHYKNVHSTPLTD 132
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 KKKEETCCVLCLFSPWVA-VVSASPKPGIDVFQIDIEPEEAQKYLNSPPFTD 200
KK T C CL +PW V++ P+P D PE K ++S P TD
Sbjct: 899 KKTLGTSCEYCLKNPWSGPVMTRIPRP---FPSADDLPEFHYKNVHSTPLTD 947
>SB_48665| Best HMM Match : CM1 (HMM E-Value=2.5)
Length = 632
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 KKKEETCCVLCLFSPWVA-VVSASPKPGIDVFQIDIEPEEAQKYLNSPPFTD 200
KK T C CL +PW V++ P+P D PE K ++S P TD
Sbjct: 426 KKTLGTSCEYCLKNPWSGPVMTRIPRP---FPSADDLPEFHYKNVHSTPLTD 474
>SB_58411| Best HMM Match : SKIP_SNW (HMM E-Value=3.2)
Length = 353
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 KKKEETCCVLCLFSPWVA-VVSASPKPGIDVFQIDIEPEEAQKYLNSPPFTD 200
KK T C CL +PW V++ P+P D PE K ++S P TD
Sbjct: 169 KKTLGTSCEYCLKNPWSGPVMTRIPRP---FPSADDLPEFHYKNVHSTPLTD 217
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 KKKEETCCVLCLFSPWVA-VVSASPKPGIDVFQIDIEPEEAQKYLNSPPFTD 200
KK T C CL +PW V++ P+P D PE K ++S P TD
Sbjct: 873 KKTLGTSCEYCLKNPWSGPVMTRIPRP---FPSADDLPEFHYKNVHSTPLTD 921
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 KKKEETCCVLCLFSPWVA-VVSASPKPGIDVFQIDIEPEEAQKYLNSPPFTD 200
KK T C CL +PW V++ P+P D PE K ++S P TD
Sbjct: 1250 KKTLGTSCEYCLKNPWSGPVMTRIPRP---FPSADDLPEFHYKNVHSTPLTD 1298
>SB_12214| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 352
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 KKKEETCCVLCLFSPWVA-VVSASPKPGIDVFQIDIEPEEAQKYLNSPPFTD 200
KK T C CL +PW V++ P+P D PE K ++S P TD
Sbjct: 91 KKTLGTSCEYCLKNPWSGPVMTRIPRP---FPSADDLPEFHYKNVHSTPLTD 139
>SB_8469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 267 VEAGPTLGHYWKNGKEIENTEDYVEEVYDASQYHGQDGLGAYAYGYQTP 413
VEAG L + + + + +VE AS+ G++GL A A G TP
Sbjct: 229 VEAGRRLAKWNRQNRAKKKAVQHVESPV-ASESQGREGLRARAEGIHTP 276
>SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032)
Length = 807
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 179 KQPTIHRSSISWPHRCLTIDQIQRPEVSHS*SRPHSWT 292
KQ +HR P RCL+ID I + S P S T
Sbjct: 455 KQVPVHRYHSPRPSRCLSIDTILHDQAGACPSIPFSTT 492
>SB_54680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 486 NDLIKVRYWSDRDGFHQEDNLPKVELKQVEEAPDVRAAR-IAHEKAW 623
+D I W DG ED++ L++VE++ V R I + +W
Sbjct: 86 DDSIVTESWDFTDGLEDEDSILLSTLQEVEQSQTVNNIRHITNNASW 132
>SB_34090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 486 NDLIKVRYWSDRDGFHQEDNLPKVELKQVEEAPDVRAAR-IAHEKAW 623
+D I W DG ED++ L++VE++ V R I + +W
Sbjct: 275 DDSIVTESWDFTDGLEDEDSILLSTLQEVEQSQTVNNIRHITNNASW 321
>SB_16299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 9 IPGLQAVIHRSN*KKKEETCCVLCLFSP 92
+P V N +K +CCV C FSP
Sbjct: 123 MPRKTRVFRSDNSRKMPRSCCVFCEFSP 150
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,539,502
Number of Sequences: 59808
Number of extensions: 481324
Number of successful extensions: 1695
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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