Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0346
         (637 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g13760.1 68415.m01520 hypothetical protein                          27   1.5  
At5g62780.1 68418.m07881 DNAJ heat shock N-terminal domain-conta...    29   3.4  
At3g03680.1 68416.m00371 C2 domain-containing protein contains I...    28   4.5  
At2g37390.1 68415.m04585 heavy-metal-associated domain-containin...    28   4.5  
At5g11920.1 68418.m01394 glycosyl hydrolase family 32 protein si...    28   6.0  
At2g26410.1 68415.m03169 calmodulin-binding family protein simil...    28   6.0  
At1g19220.1 68414.m02392 transcriptional factor B3 family protei...    28   6.0  
At5g15730.1 68418.m01840 serine/threonine protein kinase, putati...    27   7.9  
At3g42820.1 68416.m04484 hypothetical protein hypothetical prote...    27   7.9  
At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transfera...    27   7.9  

>At2g13760.1 68415.m01520 hypothetical protein 
          Length = 209

 Score = 27.1 bits (57), Expect(2) = 1.5
 Identities = 14/57 (24%), Positives = 30/57 (52%)
 Frame = +3

Query: 108 SASPKPGIDVFQIDIEPEEAQKYLNSPPFTDPQLAGRTAVLPLIKYNDPRFRTVEAG 278
           ++SP PG++   ++++ E+A   L+S P        +T +  L++ ND   + +  G
Sbjct: 37  ASSPSPGMNSIDLNMDSEDANFSLSSRPMG----LKKTKLKQLLEQNDKLIKAITKG 89



 Score = 21.4 bits (43), Expect(2) = 1.5
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +3

Query: 315 IENTEDYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENRVRSGDVTG 461
           IEN    + E    +  H +DG G+  +G Q   S   E+      V G
Sbjct: 129 IENERKRILEKRAQTNQHEEDGEGSQYHGSQYRASHYQESPSHGKQVQG 177


>At5g62780.1 68418.m07881 DNAJ heat shock N-terminal
           domain-containing protein contains Pfam PF00226: DnaJ
           domain; similar to dnaJ (GI:144832) [Clostridium
           acetobutylicum]
          Length = 207

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 292 CPRVGPASTVRNLGSLYLINGKTAVR 215
           CP  G  S + N+ S  +ING+T +R
Sbjct: 104 CPNCGQNSAMTNISSTEVINGRTFIR 129


>At3g03680.1 68416.m00371 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 1017

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = +3

Query: 357 SQYHGQDGLGAYAYGYQTPES-AKVENRVRSGDVTGSY---IYK--DGKNDLIKVRYWSD 518
           SQ  G+ GL AY      P + A  E +  +   T      I K  DGK +    +    
Sbjct: 120 SQIKGEIGLKAYYVDENPPAAPAATEPKPEAAAATEEKPPEIAKAEDGKKETEAAKTEEK 179

Query: 519 RDGFHQEDNLPKVELKQVEEAPD 587
           ++G  +E+  PK E K  E+ PD
Sbjct: 180 KEGDKKEEEKPKEEAKPDEKKPD 202


>At2g37390.1 68415.m04585 heavy-metal-associated domain-containing
           protein contains Pfam PF00403: Heavy-metal-associated
           domain; similar to copper homeostasis factor (CCH)
           (ATX1) (GB:U88711) (TIGR_Ath1:At3g56240) [Arabidopsis
           thaliana]
          Length = 259

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 424 RSKIASDPETSPARISTRTAKTISSRYVTGQTVTVSTRKTT 546
           R  + SDP++    +    AKT+ +    G+  T++ +KTT
Sbjct: 134 RYLLGSDPDSITGSVDQDPAKTVEAEAPAGEDKTLTEKKTT 174


>At5g11920.1 68418.m01394 glycosyl hydrolase family 32 protein
           similar to fructan 1-exohydrolase IIa GI:13940209 from
           [Cichorium intybus]; contains Pfam profile PF00251:
           Glycosyl hydrolases family 32
          Length = 550

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 387 AYAYGYQTPESAKVENRVRSGDVTGSYIYKDGKNDLI--KVRYWSDRD 524
           +Y  G +T  +++V  ++  G+    Y++ DG+N +I   +  WS R+
Sbjct: 494 SYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSLEAWSMRN 541


>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
           to SF16 protein [Helianthus annuus] GI:560150; contains
           Pfam profile PF00612: IQ calmodulin-binding motif
          Length = 516

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 428 RKSRQIRRRHRLVYLQGRQKRSHQ 499
           R S + + RHRL+  +G QK +HQ
Sbjct: 201 RLSAENKTRHRLIQQKGHQKENHQ 224


>At1g19220.1 68414.m02392 transcriptional factor B3 family protein /
           auxin-responsive factor AUX/IAA-related contains Pfam
           profile: PF02309 AUX/IAA family
          Length = 1086

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = +3

Query: 132 DVFQIDIEPEEAQKYLNSPPFT---DPQLAGRTAVLPLIKYNDPRFRTVEAG 278
           D   I I    A    NS PFT   +P+ +    V+PL KYN   +  V  G
Sbjct: 242 DSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLG 293


>At5g15730.1 68418.m01840 serine/threonine protein kinase, putative
           similar to protein-serine/threonine kinase [Nicotiana
           tabacum] gi|505146|dbj|BAA06538
          Length = 434

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -2

Query: 423 SQIREFGIRRHMHLDRLVRGI-GTHRILLQRSPQY-SRFPFRSSSSVQEWGLLQL 265
           +++ +FG+ + M LDR+  G+ GTH  +    P Y S   +   S +  +G++ L
Sbjct: 251 AKVADFGLSKEMVLDRMTSGLKGTHGYM---DPTYISTNKYTMKSDIYSFGVIIL 302


>At3g42820.1 68416.m04484 hypothetical protein hypothetical proteins
           - Arabidopsis thaliana
          Length = 906

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 414 ESAKVENRVRSGDVTGSYIYKDGKNDLIKVRYWSDRDGFHQEDNLP 551
           ESA++++ +  G   G Y+   G N+L +  Y    D F  +DN P
Sbjct: 617 ESAEIKDNLAVGIPEGEYMDLSGTNELARCAY---NDVFTGQDNQP 659


>At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 456

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
 Frame = +3

Query: 48  KKKEETCCVLCLFSPWVAVVSASPKPGIDVFQIDIEPEEA---QKYLNSPPFTDPQLAGR 218
           ++K  +C +   F+PWV  V+AS      +  I      +   + Y+ +  F D +   +
Sbjct: 100 EEKRYSCIISSPFTPWVPAVAASHNISCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQ 159

Query: 219 TA---VLPLIKYND-PRFRTVEAGPTLGHYWKNGKEIENTEDYVEEVYDASQY 365
           T     LPL++  D P F     G    H++    E  +   YV+ V   S Y
Sbjct: 160 TVELPALPLLEVRDLPSFMLPSGG---AHFYNLMAEFADCLRYVKWVLVNSFY 209


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,800,490
Number of Sequences: 28952
Number of extensions: 330179
Number of successful extensions: 1089
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)