Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0345
         (551 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3JHW8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.5  

>UniRef50_A3JHW8 Cluster: Putative uncharacterized protein; n=1;
           Marinobacter sp. ELB17|Rep: Putative uncharacterized
           protein - Marinobacter sp. ELB17
          Length = 416

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 21/65 (32%), Positives = 37/65 (56%)
 Frame = +1

Query: 334 NFLFYFILSLLDPF**IVAH*QLFFLKYRFILFLLFHGFVNFISAYQSLRIVRY*NEDKF 513
           ++LFY      +PF   V    L+ LKY  ++ LLF GF+ +I  ++S+  ++    D+F
Sbjct: 79  DYLFYSANRTRNPF---VLSNNLYALKYLSLVLLLFLGFIFYIYGFESMVRIKI---DEF 132

Query: 514 SIFYY 528
           +I Y+
Sbjct: 133 NIPYF 137


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,995,060
Number of Sequences: 1657284
Number of extensions: 6736729
Number of successful extensions: 12115
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 11834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12111
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)