Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0345
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   2.2  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   6.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.7  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +2

Query: 164 LSKYVSVQQPLSCSIIALQSITNPSQLTETNLLEV 268
           L+KY +    L+ ++ AL  +   S++TE + +++
Sbjct: 187 LNKYTTYNTSLTLTVYALTELNGESEMTEISSMQL 221


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +2

Query: 122  MLNSKMLIV*LTIVLSKYVSVQQPLSCSIIALQSITNPSQLTETNLLEVRRCN*ERRTPS 301
            +L   +LIV + + +S+ +S ++ L  + IA    T PS++ +  L  V   N      S
Sbjct: 1739 ILLGALLIVVIGLSISQRLSYRRQLRAAKIAAFGSTGPSRMYQEVLGAVPNTNKHSMKGS 1798

Query: 302  NKL 310
            N +
Sbjct: 1799 NPI 1801


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 45  YVPSFFFFYERKS 7
           YVPS FFF+ RK+
Sbjct: 915 YVPSGFFFHLRKN 927


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,084
Number of Sequences: 2352
Number of extensions: 6973
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)