Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0343
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    26   0.25 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    23   1.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   5.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.2  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 356 REHGMDISPMCDRHNATIEKSQVGFIDYIVHPL 454
           R H  ++   C R    ++   VG+ D+IV PL
Sbjct: 261 RRHRKNLKDPCRRRQMYVDFGSVGWNDWIVAPL 293


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 175 DHRLQIRQQTHVFRHICREDHVDNHFPEGLSLLLLVKIH 59
           DH L+   + H      R +H D  F +  +L   +++H
Sbjct: 22  DHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 60


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 175 DHRLQIRQQTHVFRHICREDHVDNHFPEGLSLLLLVKIH 59
           DH L+   + H      R +H D  F +  +L   +++H
Sbjct: 175 DHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 213


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = -1

Query: 160 IRQQTHVFRHICREDHVD--NH 101
           +R+   +FR  CRE+H    NH
Sbjct: 301 MRELGRIFRAYCRENHASWVNH 322


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 332 FFQQGDREREHGMDISP 382
           F+QQ D +   GMD  P
Sbjct: 450 FWQQSDVDLSRGMDFQP 466


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 320 LMEEFFQQGDREREHGMDISP 382
           ++  F+QQ D +   G+D  P
Sbjct: 446 VLSTFWQQSDLDLSRGLDFQP 466


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 414 FSIVALCLSHIGLISMPCSRSRSPCWKNSS 325
           F I+ +CL  IG + +P    ++   +NS+
Sbjct: 74  FCIIIMCLGVIGNVMVPIVIFKTKDMRNST 103


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 414 FSIVALCLSHIGLISMPCSRSRSPCWKNSS 325
           F I+ +CL  IG + +P    ++   +NS+
Sbjct: 74  FCIIIMCLGVIGNVMVPIVIFKTKDMRNST 103


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/42 (21%), Positives = 21/42 (50%)
 Frame = +3

Query: 369 WISVQCVTDIMLL*KNLKSVSLTISCILCGKLGQIWYILTLK 494
           W+  +C+T+ M++ KN + +   +     G   +  Y + L+
Sbjct: 38  WLRFECLTNEMIVTKNGRRMFPVVKVTAAGLDPKAMYTVLLE 79


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 339 WKNSSISNATHRLYSGNG 286
           W+N+  S + +R ++ NG
Sbjct: 364 WRNNQPSTSNNRWHNNNG 381


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,941
Number of Sequences: 336
Number of extensions: 3013
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)