Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0343
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28729-6|AAA68292.1| 549|Caenorhabditis elegans Phosphodiestera... 268 2e-72
U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiestera... 268 2e-72
U28729-4|AAN60496.1| 599|Caenorhabditis elegans Phosphodiestera... 268 2e-72
U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiestera... 268 2e-72
U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiestera... 268 2e-72
U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiestera... 268 2e-72
Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical pr... 112 1e-25
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 88 3e-18
Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical pr... 88 3e-18
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 88 3e-18
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 88 3e-18
AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical... 88 3e-18
AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 84 5e-17
Z12017-7|CAH19088.1| 856|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z12017-6|CAE47469.1| 734|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z12017-5|CAA78052.2| 859|Caenorhabditis elegans Hypothetical pr... 64 6e-11
AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 64 6e-11
U80032-1|AAB53879.2| 568|Caenorhabditis elegans Phosphodiestera... 53 1e-07
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 29 2.2
AC006662-1|AAM98008.2| 707|Caenorhabditis elegans Hypothetical ... 29 2.9
Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 27 6.6
>U28729-6|AAA68292.1| 549|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforma protein.
Length = 549
Score = 268 bits (657), Expect = 2e-72
Identities = 123/176 (69%), Positives = 151/176 (85%)
Frame = +2
Query: 17 VAFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAG 196
VAFKLLQ+ CD NL +QR RK+VIDMVL+TDMSKHMSLLADLKTMVE KKVAG
Sbjct: 358 VAFKLLQDSNCDFLANL-SRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAG 416
Query: 197 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDI 376
+ V++LD Y D+IQVL++++H ADLSNPTKP+ LY++W +MEE+++QGD+E+E G++I
Sbjct: 417 NNVIVLDKYNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEI 476
Query: 377 SPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMI 544
SPMCDR N TIEKSQVGFIDYIVHPL+ETWADLV+PDAQ+ILD LEENR++YQS I
Sbjct: 477 SPMCDRGNVTIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRI 532
>U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformd protein.
Length = 674
Score = 268 bits (657), Expect = 2e-72
Identities = 123/176 (69%), Positives = 151/176 (85%)
Frame = +2
Query: 17 VAFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAG 196
VAFKLLQ+ CD NL +QR RK+VIDMVL+TDMSKHMSLLADLKTMVE KKVAG
Sbjct: 483 VAFKLLQDSNCDFLANL-SRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAG 541
Query: 197 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDI 376
+ V++LD Y D+IQVL++++H ADLSNPTKP+ LY++W +MEE+++QGD+E+E G++I
Sbjct: 542 NNVIVLDKYNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEI 601
Query: 377 SPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMI 544
SPMCDR N TIEKSQVGFIDYIVHPL+ETWADLV+PDAQ+ILD LEENR++YQS I
Sbjct: 602 SPMCDRGNVTIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRI 657
>U28729-4|AAN60496.1| 599|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformc protein.
Length = 599
Score = 268 bits (657), Expect = 2e-72
Identities = 123/176 (69%), Positives = 151/176 (85%)
Frame = +2
Query: 17 VAFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAG 196
VAFKLLQ+ CD NL +QR RK+VIDMVL+TDMSKHMSLLADLKTMVE KKVAG
Sbjct: 408 VAFKLLQDSNCDFLANL-SRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAG 466
Query: 197 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDI 376
+ V++LD Y D+IQVL++++H ADLSNPTKP+ LY++W +MEE+++QGD+E+E G++I
Sbjct: 467 NNVIVLDKYNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEI 526
Query: 377 SPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMI 544
SPMCDR N TIEKSQVGFIDYIVHPL+ETWADLV+PDAQ+ILD LEENR++YQS I
Sbjct: 527 SPMCDRGNVTIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRI 582
>U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforme protein.
Length = 612
Score = 268 bits (657), Expect = 2e-72
Identities = 123/176 (69%), Positives = 151/176 (85%)
Frame = +2
Query: 17 VAFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAG 196
VAFKLLQ+ CD NL +QR RK+VIDMVL+TDMSKHMSLLADLKTMVE KKVAG
Sbjct: 421 VAFKLLQDSNCDFLANL-SRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAG 479
Query: 197 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDI 376
+ V++LD Y D+IQVL++++H ADLSNPTKP+ LY++W +MEE+++QGD+E+E G++I
Sbjct: 480 NNVIVLDKYNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEI 539
Query: 377 SPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMI 544
SPMCDR N TIEKSQVGFIDYIVHPL+ETWADLV+PDAQ+ILD LEENR++YQS I
Sbjct: 540 SPMCDRGNVTIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRI 595
>U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformb protein.
Length = 626
Score = 268 bits (657), Expect = 2e-72
Identities = 123/176 (69%), Positives = 151/176 (85%)
Frame = +2
Query: 17 VAFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAG 196
VAFKLLQ+ CD NL +QR RK+VIDMVL+TDMSKHMSLLADLKTMVE KKVAG
Sbjct: 435 VAFKLLQDSNCDFLANL-SRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAG 493
Query: 197 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDI 376
+ V++LD Y D+IQVL++++H ADLSNPTKP+ LY++W +MEE+++QGD+E+E G++I
Sbjct: 494 NNVIVLDKYNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEI 553
Query: 377 SPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMI 544
SPMCDR N TIEKSQVGFIDYIVHPL+ETWADLV+PDAQ+ILD LEENR++YQS I
Sbjct: 554 SPMCDRGNVTIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRI 609
>U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformg protein.
Length = 673
Score = 268 bits (657), Expect = 2e-72
Identities = 123/176 (69%), Positives = 151/176 (85%)
Frame = +2
Query: 17 VAFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAG 196
VAFKLLQ+ CD NL +QR RK+VIDMVL+TDMSKHMSLLADLKTMVE KKVAG
Sbjct: 482 VAFKLLQDSNCDFLANL-SRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKKVAG 540
Query: 197 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDI 376
+ V++LD Y D+IQVL++++H ADLSNPTKP+ LY++W +MEE+++QGD+E+E G++I
Sbjct: 541 NNVIVLDKYNDKIQVLQSMIHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEI 600
Query: 377 SPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMI 544
SPMCDR N TIEKSQVGFIDYIVHPL+ETWADLV+PDAQ+ILD LEENR++YQS I
Sbjct: 601 SPMCDRGNVTIEKSQVGFIDYIVHPLYETWADLVYPDAQNILDQLEENREWYQSRI 656
>Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical
protein T04D3.3 protein.
Length = 664
Score = 112 bits (270), Expect = 1e-25
Identities = 59/152 (38%), Positives = 90/152 (59%)
Frame = +2
Query: 23 FKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGSG 202
F+L++ D +I +L +E ++ LR MVI++VL+TDMS H + +K+M
Sbjct: 411 FRLMKEDDKNILTHLTRDEYKE-LRNMVIEIVLATDMSTHFMQIKTMKSM---------- 459
Query: 203 VLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDISP 382
L L D+ + L +VH D+S+P KP L++RW ++EEFF+QGD E G+ SP
Sbjct: 460 -LSLPEGIDKNKALCLIVHACDISHPAKPWNLHERWTEGVLEEFFRQGDLEASMGLPYSP 518
Query: 383 MCDRHNATIEKSQVGFIDYIVHPLWETWADLV 478
+CDRH + SQ+GFID+IV P +L+
Sbjct: 519 LCDRHTVHVADSQIGFIDFIVEPTMVVCGELL 550
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 88.2 bits (209), Expect = 3e-18
Identities = 48/145 (33%), Positives = 84/145 (57%)
Frame = +2
Query: 20 AFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGS 199
++KLL NL E ++ R +V++ +L+TD+ +H ++ M T+++
Sbjct: 358 SWKLLNKPENHFIENLDPAEMKR-FRYLVLEYILATDLKQHFEII-----MTFTERLTEI 411
Query: 200 GVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDIS 379
V + TDR+ + + L+ AD+++PTKP L+++W + EEF++QGD ER G+ I+
Sbjct: 412 DVQV---ETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRRGLPIT 468
Query: 380 PMCDRHNATIEKSQVGFIDYIVHPL 454
P DR +A + K Q FI ++V PL
Sbjct: 469 PYMDRGDAQVAKLQDSFIAHVVSPL 493
>Z93376-1|CAB07570.3| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 88.2 bits (209), Expect = 3e-18
Identities = 48/145 (33%), Positives = 84/145 (57%)
Frame = +2
Query: 20 AFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGS 199
++KLL NL E ++ R +V++ +L+TD+ +H ++ M T+++
Sbjct: 237 SWKLLNKPENHFIENLDPAEMKR-FRYLVLEYILATDLKQHFEII-----MTFTERLTEI 290
Query: 200 GVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDIS 379
V + TDR+ + + L+ AD+++PTKP L+++W + EEF++QGD ER G+ I+
Sbjct: 291 DVQV---ETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRRGLPIT 347
Query: 380 PMCDRHNATIEKSQVGFIDYIVHPL 454
P DR +A + K Q FI ++V PL
Sbjct: 348 PYMDRGDAQVAKLQDSFIAHVVSPL 372
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 88.2 bits (209), Expect = 3e-18
Identities = 48/145 (33%), Positives = 84/145 (57%)
Frame = +2
Query: 20 AFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGS 199
++KLL NL E ++ R +V++ +L+TD+ +H ++ M T+++
Sbjct: 358 SWKLLNKPENHFIENLDPAEMKR-FRYLVLEYILATDLKQHFEII-----MTFTERLTEI 411
Query: 200 GVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDIS 379
V + TDR+ + + L+ AD+++PTKP L+++W + EEF++QGD ER G+ I+
Sbjct: 412 DVQV---ETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRRGLPIT 468
Query: 380 PMCDRHNATIEKSQVGFIDYIVHPL 454
P DR +A + K Q FI ++V PL
Sbjct: 469 PYMDRGDAQVAKLQDSFIAHVVSPL 493
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 88.2 bits (209), Expect = 3e-18
Identities = 48/145 (33%), Positives = 84/145 (57%)
Frame = +2
Query: 20 AFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGS 199
++KLL NL E ++ R +V++ +L+TD+ +H ++ M T+++
Sbjct: 358 SWKLLNKPENHFIENLDPAEMKR-FRYLVLEYILATDLKQHFEII-----MTFTERLTEI 411
Query: 200 GVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDIS 379
V + TDR+ + + L+ AD+++PTKP L+++W + EEF++QGD ER G+ I+
Sbjct: 412 DVQV---ETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRRGLPIT 468
Query: 380 PMCDRHNATIEKSQVGFIDYIVHPL 454
P DR +A + K Q FI ++V PL
Sbjct: 469 PYMDRGDAQVAKLQDSFIAHVVSPL 493
>AL132949-41|CAC35868.2| 472|Caenorhabditis elegans Hypothetical
protein E01F3.1a protein.
Length = 472
Score = 88.2 bits (209), Expect = 3e-18
Identities = 48/145 (33%), Positives = 84/145 (57%)
Frame = +2
Query: 20 AFKLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGS 199
++KLL NL E ++ R +V++ +L+TD+ +H ++ M T+++
Sbjct: 237 SWKLLNKPENHFIENLDPAEMKR-FRYLVLEYILATDLKQHFEII-----MTFTERLTEI 290
Query: 200 GVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDIS 379
V + TDR+ + + L+ AD+++PTKP L+++W + EEF++QGD ER G+ I+
Sbjct: 291 DVQV---ETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRRGLPIT 347
Query: 380 PMCDRHNATIEKSQVGFIDYIVHPL 454
P DR +A + K Q FI ++V PL
Sbjct: 348 PYMDRGDAQVAKLQDSFIAHVVSPL 372
>AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodiesterase
protein 6, isoforma protein.
Length = 760
Score = 84.2 bits (199), Expect = 5e-17
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Frame = +2
Query: 17 VAFKL-LQ-NDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKV 190
+AF+L LQ N +IF +L EE Q +R +++MVL+TD+S+H LA M T
Sbjct: 578 LAFQLTLQHNANVNIFSSLSREEFIQ-MRHAMVEMVLATDISRHFEYLAKFNKMHVTD-- 634
Query: 191 AGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGM 370
V T+ + + + LV CAD+SNP + L +RW ++EE+F+Q E+E G+
Sbjct: 635 ----VPEEQRDTNSLTICDMLVKCADISNPAREWGLCQRWAHRIVEEYFEQTREEKEKGL 690
Query: 371 DIS-PMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSM 541
++ + DR+ + +Q GFID + T+ + ++ D LE N + ++ M
Sbjct: 691 PVTMEVFDRNTCNVPITQCGFIDMFAREAFATFTEFA--KLGELSDQLESNYEKWKVM 746
>Z12017-7|CAH19088.1| 856|Caenorhabditis elegans Hypothetical
protein R08D7.6c protein.
Length = 856
Score = 64.1 bits (149), Expect = 6e-11
Identities = 48/165 (29%), Positives = 83/165 (50%)
Frame = +2
Query: 26 KLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGSGV 205
KLLQ + C I NL + R T+ + +++L+TD+S H+ +KTM+ G
Sbjct: 501 KLLQQEECSILENLPAADFR-TIVNTIREVILATDISAHLRKQERIKTMISE----GYNP 555
Query: 206 LLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDISPM 385
+ D+ R ++ ++ +DLS+ K KR + EFF QGD E + G+ M
Sbjct: 556 MSFDH---RYLLMCLVMTASDLSDQAKNFHNAKRIAENIYLEFFAQGDLELQLGVKPLEM 612
Query: 386 CDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEEN 520
DR NA + Q+ F+ I P+++ A +V P+ + + ++ N
Sbjct: 613 MDRTNAYVPTVQIDFLFKIGVPVFQLLASVV-PEGRTTSEAIDAN 656
>Z12017-6|CAE47469.1| 734|Caenorhabditis elegans Hypothetical
protein R08D7.6b protein.
Length = 734
Score = 64.1 bits (149), Expect = 6e-11
Identities = 48/165 (29%), Positives = 83/165 (50%)
Frame = +2
Query: 26 KLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGSGV 205
KLLQ + C I NL + R T+ + +++L+TD+S H+ +KTM+ G
Sbjct: 504 KLLQQEECSILENLPAADFR-TIVNTIREVILATDISAHLRKQERIKTMISE----GYNP 558
Query: 206 LLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDISPM 385
+ D+ R ++ ++ +DLS+ K KR + EFF QGD E + G+ M
Sbjct: 559 MSFDH---RYLLMCLVMTASDLSDQAKNFHNAKRIAENIYLEFFAQGDLELQLGVKPLEM 615
Query: 386 CDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEEN 520
DR NA + Q+ F+ I P+++ A +V P+ + + ++ N
Sbjct: 616 MDRTNAYVPTVQIDFLFKIGVPVFQLLASVV-PEGRTTSEAIDAN 659
>Z12017-5|CAA78052.2| 859|Caenorhabditis elegans Hypothetical
protein R08D7.6a protein.
Length = 859
Score = 64.1 bits (149), Expect = 6e-11
Identities = 48/165 (29%), Positives = 83/165 (50%)
Frame = +2
Query: 26 KLLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGSGV 205
KLLQ + C I NL + R T+ + +++L+TD+S H+ +KTM+ G
Sbjct: 504 KLLQQEECSILENLPAADFR-TIVNTIREVILATDISAHLRKQERIKTMISE----GYNP 558
Query: 206 LLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDISPM 385
+ D+ R ++ ++ +DLS+ K KR + EFF QGD E + G+ M
Sbjct: 559 MSFDH---RYLLMCLVMTASDLSDQAKNFHNAKRIAENIYLEFFAQGDLELQLGVKPLEM 615
Query: 386 CDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEEN 520
DR NA + Q+ F+ I P+++ A +V P+ + + ++ N
Sbjct: 616 MDRTNAYVPTVQIDFLFKIGVPVFQLLASVV-PEGRTTSEAIDAN 659
>AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans
Phosphodiesterase protein 6, isoformb protein.
Length = 697
Score = 64.1 bits (149), Expect = 6e-11
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Frame = +2
Query: 17 VAFKL-LQ-NDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKV 190
+AF+L LQ N +IF +L EE Q +R +++MVL+TD+S+H LA M T
Sbjct: 578 LAFQLTLQHNANVNIFSSLSREEFIQ-MRHAMVEMVLATDISRHFEYLAKFNKMHVTD-- 634
Query: 191 AGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHG 367
V T+ + + + LV CAD+SNP + L +RW ++EE+F+Q R E G
Sbjct: 635 ----VPEEQRDTNSLTICDMLVKCADISNPAREWGLCQRWAHRIVEEYFEQVRRSGEGG 689
>U80032-1|AAB53879.2| 568|Caenorhabditis elegans Phosphodiesterase
protein 5 protein.
Length = 568
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/125 (28%), Positives = 61/125 (48%)
Frame = +2
Query: 29 LLQNDGCDIFVNLHEEEQRQTLRKMVIDMVLSTDMSKHMSLLADLKTMVETKKVAGSGVL 208
+LQ DG +I +L E+ ++TL ++ +L+TD++ S A L +++ +
Sbjct: 420 ILQQDGHNILKSLSSEDYKKTL-SLIKHCILATDLALFFSNKAKLNVILD------NNTF 472
Query: 209 LLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFQQGDREREHGMDISPMC 388
++ R+ ++ DL KP + V ++ EEF+ QGD ER G + PM
Sbjct: 473 DINRQEHRLLTQAVMMTGCDLVASAKPWNIQTETVKVIFEEFYDQGDAERLSGKEPIPMM 532
Query: 389 DRHNA 403
DR A
Sbjct: 533 DRQQA 537
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 269 LSNPTKPLPLYKRWVALLMEEFFQQGDREREH 364
L PTKPLP+YKR V + F+ +H
Sbjct: 433 LKIPTKPLPIYKRHVCKTCKREFRDAKMLEKH 464
>AC006662-1|AAM98008.2| 707|Caenorhabditis elegans Hypothetical
protein H23L24.3b protein.
Length = 707
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -2
Query: 486 SGCTKSAQVSHRGCTI*SMKPT*DFSIVALCLSHIGLISMPCSRS-RSPC---WKNSSIS 319
S +S + R TI + + + +V+LC IG+I P RS + PC W N +S
Sbjct: 112 SSFIRSRNTASRRFTIDTSRAKSNQYVVSLCSKKIGIIEYPDGRSDKQPCDVYWHNVVLS 171
Query: 318 N 316
+
Sbjct: 172 D 172
>Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical
protein F14D7.2 protein.
Length = 457
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 251 DSLILEFYQCSCLAIRHRYPRLS-SFRPSSSDPPADSCVSTYL 126
D +I + + S + HR PR S S PSSS+PPA + ST+L
Sbjct: 59 DKVIKKQPETSSSSPEHRSPRRSKSAPPSSSNPPASA--STFL 99
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 137 KHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSN 277
K + + D+K +E K+ + VL D+ +L N CA+L N
Sbjct: 59 KSFTFIGDVKIQIEVKEETDTIVLHTDSLNINNVLLHNACVCANLKN 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,448,026
Number of Sequences: 27780
Number of extensions: 289783
Number of successful extensions: 909
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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