Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0342
         (635 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4N6L0 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q3B0H5 Cluster: Possible potassium channel, VIC family;...    35   1.4  

>UniRef50_Q4N6L0 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 487

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
 Frame = +2

Query: 278 NYFSTNTGFNKKNPSVTPLPTSEK-----KTIFLGRRCNRLYY*AN*N*KKNVLLPFLKV 442
           NYFSTN  FN K      LP +EK     K++ +       YY       K   LPF  +
Sbjct: 33  NYFSTNV-FNDKTVDFQNLPFNEKFVNNLKSLGIDNLKLFQYYTFKLLTDKLAFLPFNSL 91

Query: 443 LSVQAHFKERL*RHRCNDRNNVRSCRTKSQFIVGFFIRRSQLTFTVLSVFDEIKIVL 613
           ++ + + +ERL     ND N  ++  T   F+  F    S    T ++ FD   +++
Sbjct: 92  INSRINNEERLKIVLYNDLNTGKTIGTLLPFLYRFSTAHSNYNETTVNGFDRKLLII 148


>UniRef50_Q3B0H5 Cluster: Possible potassium channel, VIC family;
           n=10; Synechococcus|Rep: Possible potassium channel, VIC
           family - Synechococcus sp. (strain CC9902)
          Length = 282

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 373 PPPEKYRFFFTGRQWCNRRVFFIKPRIRAKIILYCYY*GR 254
           P P KY F FTG    +  +FF  P++R++++L+ +  GR
Sbjct: 84  PSPRKYLFSFTGLIDLSAVLFFFVPQVRSELLLWVFKFGR 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,924,952
Number of Sequences: 1657284
Number of extensions: 10695006
Number of successful extensions: 18427
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18426
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)