Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0342
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   4.9  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   6.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 175 KKKENRYSNKAPFHGVDRSGS 237
           KK+  R ++K+P H VD S S
Sbjct: 240 KKELIRQTHKSPSHSVDNSNS 260


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 73  FYW*AELPTVVVGASPENRYFDLKVLVTRS 162
           FYW  E+PT+ V    +    +L +L  +S
Sbjct: 319 FYWLNEIPTMPVSIKDQTIKEELALLAQQS 348


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 275 QNYFSTNTGFNKKNPSVTPLPTSEKKTIFLGRRC 376
           Q   ST +  +  +PS +P P S +    + RRC
Sbjct: 204 QRTASTASSASNYSPSQSPEPESVRPLSLVVRRC 237


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +2

Query: 311 KNPSVTPLPTSEKKTIFLGRRCNRLYY 391
           +NP   P P       FL  RC + +Y
Sbjct: 97  RNPKYFPNPDKFDPDNFLPERCQQRHY 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,610
Number of Sequences: 336
Number of extensions: 2914
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)