Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0342
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ165550-1|AAZ95162.1|  973|Drosophila melanogaster SNM protein.       29   7.0  
AY118320-1|AAM48349.1|  696|Drosophila melanogaster LD06204p pro...    29   7.0  
AY075256-1|AAL68123.1|  456|Drosophila melanogaster AT21944p pro...    29   7.0  
AE014296-251|AAF47494.2|  944|Drosophila melanogaster CG13916-PA...    29   7.0  
AE013599-3865|AAS64768.1|  696|Drosophila melanogaster CG3419-PB...    29   7.0  
AE013599-3864|AAF47201.1|  830|Drosophila melanogaster CG3419-PA...    29   7.0  

>DQ165550-1|AAZ95162.1|  973|Drosophila melanogaster SNM protein.
          Length = 973

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -3

Query: 132 VTIFRRRADDDRWQFSSPIKFSLY*NSQKRRLENRGDLVPNSCS 1
           +T+     +  +W  + P+ FSL    ++RRL N  DL P + S
Sbjct: 602 LTVLSGHFNLSKWDLTEPLLFSLKMLLRQRRLPNGDDLPPEAFS 645


>AY118320-1|AAM48349.1|  696|Drosophila melanogaster LD06204p
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = -1

Query: 380 CYTAAREISFFFHW*AVV*PTGFFY*TPYSC*NNFVLLLLRTTRVQHSLPLRSTPWNGAL 201
           C+ A R +  F      V P  FF        ++F L   RT    +SLP+RS     AL
Sbjct: 22  CFAAVRLLLVFVPQLGYVHPDEFFQSVEVMTGDHFRLEHTRTWEFNNSLPVRSIVLPFAL 81

Query: 200 LE*RFSFF 177
           L   +SF+
Sbjct: 82  LRIPWSFY 89


>AY075256-1|AAL68123.1|  456|Drosophila melanogaster AT21944p
           protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -3

Query: 132 VTIFRRRADDDRWQFSSPIKFSLY*NSQKRRLENRGDLVPNSCS 1
           +T+     +  +W  + P+ FSL    ++RRL N  DL P + S
Sbjct: 85  LTVLSGHFNLSKWDLTEPLLFSLKMLLRQRRLPNGDDLPPEAFS 128


>AE014296-251|AAF47494.2|  944|Drosophila melanogaster CG13916-PA
           protein.
          Length = 944

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -3

Query: 132 VTIFRRRADDDRWQFSSPIKFSLY*NSQKRRLENRGDLVPNSCS 1
           +T+     +  +W  + P+ FSL    ++RRL N  DL P + S
Sbjct: 573 LTVLSGHFNLSKWDLTEPLLFSLKMLLRQRRLPNGDDLPPEAFS 616


>AE013599-3865|AAS64768.1|  696|Drosophila melanogaster CG3419-PB,
           isoform B protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = -1

Query: 380 CYTAAREISFFFHW*AVV*PTGFFY*TPYSC*NNFVLLLLRTTRVQHSLPLRSTPWNGAL 201
           C+ A R +  F      V P  FF        ++F L   RT    +SLP+RS     AL
Sbjct: 22  CFAAVRLLLVFVPQLGYVHPDEFFQSVEVMTGDHFRLEHTRTWEFNNSLPVRSIVLPFAL 81

Query: 200 LE*RFSFF 177
           L   +SF+
Sbjct: 82  LRIPWSFY 89


>AE013599-3864|AAF47201.1|  830|Drosophila melanogaster CG3419-PA,
           isoform A protein.
          Length = 830

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = -1

Query: 380 CYTAAREISFFFHW*AVV*PTGFFY*TPYSC*NNFVLLLLRTTRVQHSLPLRSTPWNGAL 201
           C+ A R +  F      V P  FF        ++F L   RT    +SLP+RS     AL
Sbjct: 22  CFAAVRLLLVFVPQLGYVHPDEFFQSVEVMTGDHFRLEHTRTWEFNNSLPVRSIVLPFAL 81

Query: 200 LE*RFSFF 177
           L   +SF+
Sbjct: 82  LRIPWSFY 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,676,488
Number of Sequences: 53049
Number of extensions: 492722
Number of successful extensions: 790
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)