Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0341
         (563 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_35141| Best HMM Match : p450 (HMM E-Value=0)                        29   3.5  
SB_2334| Best HMM Match : p450 (HMM E-Value=0)                         29   3.5  
SB_51372| Best HMM Match : Pyr_redox (HMM E-Value=3e-12)               28   4.6  
SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)                  28   6.1  
SB_31348| Best HMM Match : ERM (HMM E-Value=0)                         28   6.1  

>SB_35141| Best HMM Match : p450 (HMM E-Value=0)
          Length = 565

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -2

Query: 196 RRPWTSAVQGAEPSRCLPMFTNFALPQLFIVLYRPPDIFHITAAIKTSLPLMLKPSCRI 20
           R P+     GA P  C+ M   FAL ++ +VL++    +    +  T +PL+L P   +
Sbjct: 496 RHPFQFIPFGAGPRNCIGM--RFALNEVKLVLFQILSKYKFVRSPDTQVPLVLIPGATL 552


>SB_2334| Best HMM Match : p450 (HMM E-Value=0)
          Length = 498

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -2

Query: 196 RRPWTSAVQGAEPSRCLPMFTNFALPQLFIVLYRPPDIFHITAAIKTSLPLMLKPSCRI 20
           R P+     GA P  C+ M   FAL ++ +VL++    +    +  T +PL+L P   +
Sbjct: 429 RHPFQFIPFGAGPRNCIGM--RFALNEVKLVLFQILSKYKFVRSPDTQVPLVLIPGAAL 485


>SB_51372| Best HMM Match : Pyr_redox (HMM E-Value=3e-12)
          Length = 872

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 518 QVLRSQV*LQRLPHPSNRNALLLH 447
           Q LR Q  +QR P P+ RN++ LH
Sbjct: 22  QALRQQNQVQRRPEPTPRNSIFLH 45


>SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)
          Length = 318

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +1

Query: 151 SGLALPLALLKSMGDGNHSPSGGPYARLPT 240
           SG+  PLA   S  D  H P GGP A  PT
Sbjct: 33  SGIFSPLASSTSASDSRHRPVGGP-AYSPT 61


>SB_31348| Best HMM Match : ERM (HMM E-Value=0)
          Length = 665

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 297 EISRHYTNCETMDVFFYC 244
           E+S+H TNCE    F++C
Sbjct: 526 ELSQHCTNCEKKFAFYFC 543


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,295,784
Number of Sequences: 59808
Number of extensions: 425439
Number of successful extensions: 986
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)