Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0341
         (563 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J03177-1|AAA28535.1|  510|Drosophila melanogaster protein ( D.me...    31   1.4  
BT023936-1|ABB36440.1|  510|Drosophila melanogaster RE06859p pro...    31   1.4  
AE014297-4241|AAF56798.1|  510|Drosophila melanogaster CG10002-P...    31   1.4  
AE014298-2878|AAF48975.1|  743|Drosophila melanogaster CG14204-P...    28   7.6  

>J03177-1|AAA28535.1|  510|Drosophila melanogaster protein (
           D.melanogaster forkhead protein (fkh) gene, complete
           cds. ).
          Length = 510

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 107 CVIQTPRHIPHHRRHKN--LASINVKTLVPNSCSPGI 3
           C+ Q P+H+P H  H++  L    +  ++ N C P +
Sbjct: 391 CLSQQPQHVPTHHHHQHHQLQQEELSAMMANRCHPSL 427


>BT023936-1|ABB36440.1|  510|Drosophila melanogaster RE06859p
           protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 107 CVIQTPRHIPHHRRHKN--LASINVKTLVPNSCSPGI 3
           C+ Q P+H+P H  H++  L    +  ++ N C P +
Sbjct: 391 CLSQQPQHVPTHHHHQHHQLQQEELSAMMANRCHPSL 427


>AE014297-4241|AAF56798.1|  510|Drosophila melanogaster CG10002-PA
           protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 107 CVIQTPRHIPHHRRHKN--LASINVKTLVPNSCSPGI 3
           C+ Q P+H+P H  H++  L    +  ++ N C P +
Sbjct: 391 CLSQQPQHVPTHHHHQHHQLQQEELSAMMANRCHPSL 427


>AE014298-2878|AAF48975.1|  743|Drosophila melanogaster CG14204-PA
           protein.
          Length = 743

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 215 PDGEWLPSPMDFSSARGRAKPLPTDVYKLCLASIVHCV 102
           P+ E LP P+   SAR  ++ L T V      +++HC+
Sbjct: 246 PEQEKLPRPIGAFSARATSRSLFTIVENTANPNVIHCL 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,255,294
Number of Sequences: 53049
Number of extensions: 642059
Number of successful extensions: 1480
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)