Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0341
         (563 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58760-9|AAK31465.1|  654|Caenorhabditis elegans Dishevelled rel...    28   4.0  
U23181-3|AAR12989.1|   80|Caenorhabditis elegans Insulin related...    28   5.3  
Z70286-2|CAA94290.1|  529|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AJ582071-1|CAE46541.1|  529|Caenorhabditis elegans flavin monoox...    27   7.0  
Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>U58760-9|AAK31465.1|  654|Caenorhabditis elegans Dishevelled
           related protein 2 protein.
          Length = 654

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -1

Query: 194 SPMDFSSARGRAKPLPTDVYKLCLASIVHCVIQTPRHIPHHRRHKN 57
           +P  FS    +A  LPT V K    +  H      RH+P H +H N
Sbjct: 222 NPTPFSDDESQASSLPTYVKKAHAYNRKHAPQAYERHLP-HMKHNN 266


>U23181-3|AAR12989.1|   80|Caenorhabditis elegans Insulin related
           protein 20 protein.
          Length = 80

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -1

Query: 104 VIQTPRHIPHHRRHKNLASI----NVKTLVPNSCS 12
           +++ P+H  HH RHK    +     +K + P+ CS
Sbjct: 19  LLKEPKHHHHHHRHKGYCGVKAVKKLKQICPDLCS 53


>Z70286-2|CAA94290.1|  529|Caenorhabditis elegans Hypothetical
           protein K08C7.5 protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 336 LNHITLHPSIFNLEISRHYTNCETMDVFFYCPCRQT 229
           + HI L   + N+E S++Y N  T  V +  P  +T
Sbjct: 101 MKHIKLRHRVLNIERSKNYDNDGTWKVIYQTPEEKT 136


>AJ582071-1|CAE46541.1|  529|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 336 LNHITLHPSIFNLEISRHYTNCETMDVFFYCPCRQT 229
           + HI L   + N+E S++Y N  T  V +  P  +T
Sbjct: 101 MKHIKLRHRVLNIERSKNYDNDGTWKVIYQTPEEKT 136


>Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical
           protein T05C12.5 protein.
          Length = 168

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -2

Query: 499 YSYNGCPTLQTETHYCFTSNLIEVQLKTSNYRC*YQIKRTFNYKDKCRVLS 347
           Y+ + CP LQT+T    TS++ + Q+++ N +   Q+    N K K +V S
Sbjct: 12  YTISVCPVLQTDT--STTSSVAKRQIESKNAQLLRQLIEKKNKKLKKKVYS 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,994,443
Number of Sequences: 27780
Number of extensions: 307196
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)