Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0339
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical pr...   155   2e-38
U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical pr...   155   2e-38

>U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical
           protein T22F3.3b protein.
          Length = 846

 Score =  155 bits (376), Expect = 2e-38
 Identities = 80/133 (60%), Positives = 92/133 (69%), Gaps = 3/133 (2%)
 Frame = +3

Query: 237 LHFS---ERSKCCDPAGITILLSHTPVKDHLVSRWIRTQQYYYENDPKRVYYLSLEYYMG 407
           LHFS   +R+   D       L++T V+DHLVSRWIRTQQ+YY+ DPKRVYYLSLE+YMG
Sbjct: 34  LHFSIIKDRNVATD-RDYYFALANT-VRDHLVSRWIRTQQHYYDKDPKRVYYLSLEFYMG 91

Query: 408 RSLQNTMINLGIQGTVDEALYQXXXXXXXXXXXXXXXXXXXXXXXRLAACFLDSMATLGL 587
           R+L NTM+NLGIQ TVDEALYQ                       RLAACFLDSMATLG+
Sbjct: 92  RTLSNTMMNLGIQATVDEALYQLGLDIEELQEIEEDAGLGNGGLGRLAACFLDSMATLGI 151

Query: 588 AAYGYGIRYEYGI 626
            AYGYG+RYEYGI
Sbjct: 152 PAYGYGLRYEYGI 164



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 31/51 (60%), Positives = 41/51 (80%)
 Frame = +1

Query: 136 VQTDAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRGLLF 288
           +  D ++RKQISVRGI  VENV+ +KKAFNRH+H++++KDRNVAT R   F
Sbjct: 2   ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYF 52


>U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical
           protein T22F3.3a protein.
          Length = 882

 Score =  155 bits (376), Expect = 2e-38
 Identities = 80/133 (60%), Positives = 92/133 (69%), Gaps = 3/133 (2%)
 Frame = +3

Query: 237 LHFS---ERSKCCDPAGITILLSHTPVKDHLVSRWIRTQQYYYENDPKRVYYLSLEYYMG 407
           LHFS   +R+   D       L++T V+DHLVSRWIRTQQ+YY+ DPKRVYYLSLE+YMG
Sbjct: 70  LHFSIIKDRNVATD-RDYYFALANT-VRDHLVSRWIRTQQHYYDKDPKRVYYLSLEFYMG 127

Query: 408 RSLQNTMINLGIQGTVDEALYQXXXXXXXXXXXXXXXXXXXXXXXRLAACFLDSMATLGL 587
           R+L NTM+NLGIQ TVDEALYQ                       RLAACFLDSMATLG+
Sbjct: 128 RTLSNTMMNLGIQATVDEALYQLGLDIEELQEIEEDAGLGNGGLGRLAACFLDSMATLGI 187

Query: 588 AAYGYGIRYEYGI 626
            AYGYG+RYEYGI
Sbjct: 188 PAYGYGLRYEYGI 200



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 31/51 (60%), Positives = 41/51 (80%)
 Frame = +1

Query: 136 VQTDAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRGLLF 288
           +  D ++RKQISVRGI  VENV+ +KKAFNRH+H++++KDRNVAT R   F
Sbjct: 38  ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYF 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,867,253
Number of Sequences: 27780
Number of extensions: 280654
Number of successful extensions: 713
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)