Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0337
(432 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6410| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 4e-14
SB_36281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_29501| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 28 3.8
SB_24980| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_30174| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 27 6.6
SB_31124| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 27 8.7
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 27 8.7
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 27 8.7
SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 8.7
SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) 27 8.7
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 27 8.7
SB_39696| Best HMM Match : DUF536 (HMM E-Value=5) 27 8.7
SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 27 8.7
SB_24726| Best HMM Match : Retrotrans_gag (HMM E-Value=6.6) 27 8.7
SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 8.7
SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 8.7
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_6410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 74.1 bits (174), Expect = 4e-14
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +1
Query: 142 LELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFGLTSNTAKAHCPAPIGLALRKEN 321
+ELKK IEGI+K PP Q LF KD QL++D KTL + G T+ TAKA PA +GLALR+E+
Sbjct: 1 MELKKKIEGIIKRPPEDQKLF-KDDQLLDDNKTLGDCGFTNQTAKAQTPALVGLALRRED 59
>SB_36281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 100 KLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFG 255
K FT+ K T +E + G+L P +Q+ N++ EDE ++AE G
Sbjct: 148 KNVCFTEFKIPTIPIENITFVNGVLGTPAVAQIQENQNGTKTEDE-SMAEVG 198
>SB_29501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 100 KLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFG 255
K FT+ K T +E + G+L P +Q+ N++ EDE ++AE G
Sbjct: 183 KNVCFTEFKIPTIPIENITFVNGVLGTPAVAQIQENQNGTKTEDE-SMAEVG 233
>SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 235 KTLAEFGLTSNTAKAHCPAPIGLALRKENGEFEALELT 348
++L E G NTA +H P+ A+ G FE+L T
Sbjct: 408 QSLLEAGAHVNTADSHARTPLHYAVNATTGGFESLTET 445
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 124 KETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
KE T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 217 KENETYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 271
>SB_24980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.5 bits (58), Expect = 5.0
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 112 FTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFGLTSNTAKAHCPA 291
F+D T T LEL+ +LK P S L N + E E++L + A AH PA
Sbjct: 129 FSDTGVTPTSLELRAQSNSLLKNPFKSSPLSNTCIE-SESERSLGTSVTAPSRASAH-PA 186
Query: 292 PI 297
+
Sbjct: 187 VV 188
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 112 FTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDS 216
F DA++ + L L + G+ K+P S +LFN+ +
Sbjct: 555 FRDAEDGPSDLTLNMLTSGLAKLPAMSWVLFNQQT 589
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 268 TAKAHCPAPIGLALRKENGEFEALELTPYSSPPDLP 375
+A + PAP+ L+ N + TPY +PP LP
Sbjct: 893 SAPSSMPAPV--PLQPYNTPMPPISSTPYQAPPTLP 926
>SB_30174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 202 FNKDSQLMEDEKTLAEFGLTS 264
F+K+ QL+ + K L FG+TS
Sbjct: 109 FSKEEQLLRERKRLGAFGITS 129
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 27.1 bits (57), Expect = 6.6
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = -3
Query: 340 PVPQIHHS-PSSKLIQLVLDSEPLLC*RSGQ---IQPRSSHLP*AGCPC*TAFDLEEVPL 173
P PQ+ + P SK + +E L R+ Q QPRS H P A P T F PL
Sbjct: 865 PQPQLTMTAPKSKQQSQSIATEQLNSQRTSQPTLSQPRSQHPPKAMAPEQTLFSQPSTPL 924
Query: 172 GYLQSFSST 146
+ + T
Sbjct: 925 DHKEEVPRT 933
>SB_31124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 64 NIMDVFLMIRRKKLTVFTDAKETTTVLEL 150
N FL +R KK+ V +AKE LE+
Sbjct: 7 NFNQKFLALRNKKMAVIKEAKEAVKKLEM 35
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 64 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 117
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 155 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 208
>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1284
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 209 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 262
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 733 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 786
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 199 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 252
>SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 296
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 64 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 117
>SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 403
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 64 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 117
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 80 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 133
>SB_39696| Best HMM Match : DUF536 (HMM E-Value=5)
Length = 238
Score = 26.6 bits (56), Expect = 8.7
Identities = 26/92 (28%), Positives = 41/92 (44%)
Frame = +1
Query: 100 KLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFGLTSNTAKA 279
++TV D ETT + + ++E + V L ++ L+ED+ TL E T +
Sbjct: 114 EMTVIED--ETTLLEDETNLLEDEMTVIVDETTLLVYETTLLEDKTTLLEDETTLLEDET 171
Query: 280 HCPAPIGLALRKENGEFEALELTPYSSPPDLP 375
+ L E G L+ TP +S P LP
Sbjct: 172 TLLEDVTTLLVDELG----LDETPITSSPTLP 199
>SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 350 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 403
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 80 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 133
>SB_24726| Best HMM Match : Retrotrans_gag (HMM E-Value=6.6)
Length = 166
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 81 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 134
>SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 342
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 37 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 90
>SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 369
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 64 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 117
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 ETTTVLELKKMIEGILKVPPPSQML--FNKDSQLMEDEKTLAEFGLTSNTAKAHC 285
+T T +L ++ G L P P + FN ++ D +T+A+FG HC
Sbjct: 285 DTKTYKDLVDILSGHLH-PKPLVIAERFNFHNRFRHDSETVADFGAQLKKLSTHC 338
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,611,583
Number of Sequences: 59808
Number of extensions: 258975
Number of successful extensions: 1325
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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