Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0337
(432 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05260.1 68417.m00795 ubiquitin family protein contains INTER... 31 0.34
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 31 0.44
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 30 0.78
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 29 1.0
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 29 1.0
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 29 1.0
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 29 1.0
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 29 1.0
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 29 1.0
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 29 1.0
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 29 1.0
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 29 1.0
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 29 1.0
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 29 1.0
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 29 1.0
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 29 1.0
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 29 1.0
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 29 1.0
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 29 1.0
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 29 1.0
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 29 1.0
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 29 1.0
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 29 1.0
At3g62830.1 68416.m07059 NAD-dependent epimerase/dehydratase fam... 27 4.1
At3g49600.1 68416.m05421 ubiquitin-specific protease 26 (UBP26) ... 27 4.1
At2g47650.1 68415.m05950 NAD-dependent epimerase/dehydratase fam... 27 4.1
At1g14110.1 68414.m01668 xyloglucan fucosyltransferase family pr... 27 5.5
At2g24100.1 68415.m02879 expressed protein 27 7.2
At1g14070.1 68414.m01664 xyloglucan fucosyltransferase, putative... 27 7.2
At4g30150.1 68417.m04287 expressed protein 26 9.6
At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR cla... 26 9.6
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 26 9.6
>At4g05260.1 68417.m00795 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 259
Score = 31.1 bits (67), Expect = 0.34
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 136 TVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFGLTSNT 270
TVLE+KK IE ++P P+Q LF ++ +ED + + + N+
Sbjct: 22 TVLEIKKKIEKYQRIPVPNQTLFFGNA--LEDHLDIGQCKILQNS 64
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ LK I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ +K T+ + + + T +K I+ +PP Q L QL ED +TLA+
Sbjct: 155 MQIFVRTLTRK-TIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 212
Query: 250 FGL 258
+ +
Sbjct: 213 YNI 215
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 305 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 362
Query: 250 FGL 258
+ +
Sbjct: 363 YNI 365
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 305 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 362
Query: 250 FGL 258
+ +
Sbjct: 363 YNI 365
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 305 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 362
Query: 250 FGL 258
+ +
Sbjct: 363 YNI 365
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 77 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 134
Query: 250 FGL 258
+ +
Sbjct: 135 YNI 137
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 153 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 210
Query: 250 FGL 258
+ +
Sbjct: 211 YNI 213
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 229 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 286
Query: 250 FGL 258
+ +
Sbjct: 287 YNI 289
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 152 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQL-EDGRTLAD 209
Query: 250 FGL 258
+ +
Sbjct: 210 YNI 212
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 70 MDVFLMIRRKKLTVFTDAKETTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAE 249
M +F+ K T+ + + + T+ +K I+ +PP Q L QL ED +TLA+
Sbjct: 1 MQIFVKTLTGK-TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 58
Query: 250 FGL 258
+ +
Sbjct: 59 YNI 61
>At3g62830.1 68416.m07059 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains non-consensus CA
donor splice site at exon 1 and TA acceptor splice site
at exon 2
Length = 445
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/31 (29%), Positives = 22/31 (70%)
Frame = +1
Query: 88 IRRKKLTVFTDAKETTTVLELKKMIEGILKV 180
+R++ LTV+ D K+T + + ++EG++++
Sbjct: 312 LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 342
>At3g49600.1 68416.m05421 ubiquitin-specific protease 26 (UBP26)
similar to GI:11993492; RNA binding protein - Homo
sapiens, EMBL:AB016089 (N-terminus), several ubiquitin
carboxyl-terminal hydrolases from aa pos. 712
Length = 1067
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 130 TTTVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFGL 258
TTTV +LK MI +L V +Q L + ++ TLA+ +
Sbjct: 974 TTTVYQLKMMIWELLGVMKENQELHKGSKVIDQESATLADMNI 1016
>At2g47650.1 68415.m05950 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains non-consensus AT
donor splice site at exon 1 and non-consensus AC
acceptor splice site at exon 2
Length = 443
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/31 (29%), Positives = 22/31 (70%)
Frame = +1
Query: 88 IRRKKLTVFTDAKETTTVLELKKMIEGILKV 180
+R++ LTV+ D K+T + + ++EG++++
Sbjct: 314 LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 344
>At1g14110.1 68414.m01668 xyloglucan fucosyltransferase family
protein contains Pfam profile: PF03254 xyloglucan
fucosyltransferase
Length = 907
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 169 ILKVPPPSQMLFNKDSQLMEDEKTLAEFGLTSNT 270
I+++ PSQ ++ + + D+K LAE L S T
Sbjct: 399 IIQIYQPSQEIYQQTDNKLHDQKALAEIYLLSLT 432
>At2g24100.1 68415.m02879 expressed protein
Length = 463
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 205 NKDSQLMEDEKTLAEFGLTSNTAKAHCPAPIGLALRKENGEFEALELTPYSSPPDLPDVM 384
NK S+L + ++++F L P+P+GL+L+K E +E+ S D V
Sbjct: 38 NKRSKLWSNGTSVSKFSLLEE------PSPLGLSLKKSPSFQELIEMKLSQSGDDSNSVK 91
Query: 385 K 387
K
Sbjct: 92 K 92
>At1g14070.1 68414.m01664 xyloglucan fucosyltransferase, putative
(FUT7) nearly identical to SP|Q9XI81 Probable
fucosyltransferase 7 (EC 2.4.1.-) (AtFUT7) {Arabidopsis
thaliana}; similar to xyloglucan fucosyltransferase
GI:5231145 from (Arabidopsis thaliana)
Length = 509
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 169 ILKVPPPSQMLFNKDSQLMEDEKTLAEFGLTSNTAK 276
I++V PS+ F + + + D+K LAE L S T K
Sbjct: 383 IVEVYQPSRERFQQTDKKLHDQKALAEMYLLSLTDK 418
>At4g30150.1 68417.m04287 expressed protein
Length = 2009
Score = 26.2 bits (55), Expect = 9.6
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -1
Query: 261 GQAKFSQGLLIFHELAVLVEQHLTWRRYL*DTFNHFLQL*YCSGFLRISEDSKLFSP 91
G +FS GLL +VL E RRYL +F+H L++ + F I+E+ SP
Sbjct: 1094 GLEQFSFGLLFD---SVLYEHEFV-RRYLAPSFSHVLKMTAETFFKDITEEVNFDSP 1146
>At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 985
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -3
Query: 196 FDLEEVPLGYLQSFSSTLIL 137
F L+EVP+G+LQ+F + IL
Sbjct: 536 FLLKEVPIGFLQAFPTLRIL 555
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 136 TVLELKKMIEGILKVPPPSQMLFNKDSQLMEDEKTLAEFGLTSN 267
TVL K+ IE ++P Q +F + +L+ED + E+ + N
Sbjct: 22 TVLTFKRKIEMTQRIPVSRQTIFFQ-GKLLEDHLDIFEWDILQN 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,746,881
Number of Sequences: 28952
Number of extensions: 192016
Number of successful extensions: 597
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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