Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0335
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical...    29   2.3  
Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical pr...    28   4.0  
L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase prot...    27   7.0  
U29379-7|ABC71826.1|  710|Caenorhabditis elegans Patterned expre...    27   9.2  
U29379-6|AAF99981.3|  677|Caenorhabditis elegans Patterned expre...    27   9.2  
U29379-5|ABC71825.1|  777|Caenorhabditis elegans Patterned expre...    27   9.2  

>AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical
           protein Y43F8C.14 protein.
          Length = 709

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 73  VVMEKEHQPDSMATITMKPEY--PPSEVYSTSEPPPAYRHRVSTSV 204
           +V++K   P ++AT T KP    PP      SEPPPA++    +S+
Sbjct: 275 IVVKKLQAPIALATSTPKPAMCRPPKH----SEPPPAFQDSFVSSI 316


>Z49074-2|CAE48829.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +2

Query: 332 LDKELALEGRAYGN-DALVADEPLPL---ANAHALHGVPAMLSSVLPETSQPSSSR 487
           L + L+ E R+Y + + L+  E  P+   +N  +L       SS+L +T QPSSSR
Sbjct: 8   LQRSLSHEMRSYSSLNPLLPSEDTPIQSFSNGVSLEEGKQASSSLLRDTGQPSSSR 63


>Z49073-9|CAE48845.1|  807|Caenorhabditis elegans Hypothetical
           protein ZK970.1b protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +2

Query: 332 LDKELALEGRAYGN-DALVADEPLPL---ANAHALHGVPAMLSSVLPETSQPSSSR 487
           L + L+ E R+Y + + L+  E  P+   +N  +L       SS+L +T QPSSSR
Sbjct: 8   LQRSLSHEMRSYSSLNPLLPSEDTPIQSFSNGVSLEEGKQASSSLLRDTGQPSSSR 63


>L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase protein
           1 protein.
          Length = 601

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 65  CLSKFIYCSSLGNAHCV 15
           C S++++C + GN HCV
Sbjct: 393 CGSQYLFCDTRGNPHCV 409


>U29379-7|ABC71826.1|  710|Caenorhabditis elegans Patterned
           expression site protein22, isoform c protein.
          Length = 710

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 226 LTVVASSFILGTFILASSWVAARSSCHQLEQR 321
           LTV   S I+GT++L    V+A   C++ EQR
Sbjct: 113 LTVFIGSLIIGTYLLVGPLVSA--LCNKYEQR 142


>U29379-6|AAF99981.3|  677|Caenorhabditis elegans Patterned
           expression site protein22, isoform a protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 226 LTVVASSFILGTFILASSWVAARSSCHQLEQR 321
           LTV   S I+GT++L    V+A   C++ EQR
Sbjct: 58  LTVFIGSLIIGTYLLVGPLVSA--LCNKYEQR 87


>U29379-5|ABC71825.1|  777|Caenorhabditis elegans Patterned
           expression site protein22, isoform b protein.
          Length = 777

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 226 LTVVASSFILGTFILASSWVAARSSCHQLEQR 321
           LTV   S I+GT++L    V+A   C++ EQR
Sbjct: 113 LTVFIGSLIIGTYLLVGPLVSA--LCNKYEQR 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,724,064
Number of Sequences: 27780
Number of extensions: 286769
Number of successful extensions: 926
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)