Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0335
(561 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g11620.1 68415.m01249 hypothetical protein 31 0.70
At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing ... 30 1.2
At1g27430.1 68414.m03343 GYF domain-containing protein contains ... 29 2.1
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 29 2.8
At1g44820.1 68414.m05134 aminoacylase, putative / N-acyl-L-amino... 28 3.7
At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger) fa... 28 4.9
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 27 6.5
At5g40070.1 68418.m04861 hypothetical protein contains similarit... 27 6.5
At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger) fa... 27 8.6
At3g45800.1 68416.m04957 hypothetical protein 27 8.6
At3g19070.1 68416.m02422 cell wall protein-related similar to ve... 27 8.6
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 27 8.6
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 27 8.6
>At2g11620.1 68415.m01249 hypothetical protein
Length = 491
Score = 30.7 bits (66), Expect = 0.70
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 76 VMEKEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHRVS 195
V+ + + M + MKPE PP ++Y +P P + S
Sbjct: 253 VLRYDGNNNGMQGVLMKPEKPPQDLYGQCQPQPQIQRNFS 292
>At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing
protein similar to unknown protein (pir||C71447)
Length = 295
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Frame = +1
Query: 100 DSMATITMKPEY--PPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILA 273
DS T+TM P+Y PP + S + + T ++ V S I F+L
Sbjct: 68 DSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMISKGFVLG 127
Query: 274 SSWVAARSSCHQLEQRGCNARQR-TRFGRQ 360
+A S + Q A R T F ++
Sbjct: 128 KDAIAKAKSLDEKHQLTSTASARVTSFDKR 157
>At1g27430.1 68414.m03343 GYF domain-containing protein contains Pfam
profile: PF02213 GYF domain
Length = 1531
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1
Query: 507 SSLKRLGREDDGWLVSGNTED 445
S ++RLG + + W+V G+T+D
Sbjct: 1148 SEIRRLGEDPNSWMVGGSTDD 1168
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 169 PPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 279
PP H +S S+ + KI+ V SSF+L T +ASS
Sbjct: 7 PPRQTHYLS-SISLLKISISKVFVSSFLLLTLSMASS 42
>At1g44820.1 68414.m05134 aminoacylase, putative /
N-acyl-L-amino-acid amidohydrolase, putative similar to
aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase
ACY-1)[Homo sapiens] SWISS-PROT:Q03154
Length = 438
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 151 YSTSEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASSWVAA 291
++T+ P P Y +S + A+ LT FI G IL +W+ +
Sbjct: 39 FNTAHPNPNYTAPISFLINQAQSIGLTTKTIEFISGKPILLITWLGS 85
>At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger) domain
Length = 359
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 401 AKAHPLP-GHHFRRLCLPKRVLCRALHPRC 315
A+ H LP HHF C+ K + RA P C
Sbjct: 318 AELHALPCNHHFHSTCIVKWLKMRATCPLC 347
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 76 VMEKEHQPDSMA--TITMKPEYPPSEVYSTSEPPP 174
+ E+E +P + T +KP PP + +T PPP
Sbjct: 222 IEEEESEPKEIQIDTFVVKPSSPPQQPPATPPPPP 256
>At5g40070.1 68418.m04861 hypothetical protein contains similarity
to hypothetical proteins of [Arabidopsis thaliana]
Length = 157
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 401 PLANAHALHGVPAMLSSVLPETSQPSSSRPSLFKDDALNHAESKINE 541
PLA+ ++ + ++ S+ P S+ S PS F NH ++ +++
Sbjct: 81 PLADHYSPDQISQLIQSLEPHVSKTQSLNPSQFSLFMYNHGDNTLSQ 127
>At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 375
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 166 PPPAYRHRVS---TSVQIAKIAALTVVASSFILGTF 264
PPP HR S TS I +A + ++A++F+L ++
Sbjct: 19 PPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSY 54
>At3g45800.1 68416.m04957 hypothetical protein
Length = 563
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 121 MKPEYPPSEVYSTSEPPP 174
MKPE PP ++Y +P P
Sbjct: 458 MKPEKPPQDLYGQCQPQP 475
>At3g19070.1 68416.m02422 cell wall protein-related similar to
vegetative cell wall protein gp1 [Chlamydomonas
reinhardtii] gi|12018147|gb|AAG45420;
Length = 346
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 91 HQPDSMATITMKPE---YPPSEVYSTSEPPPAYRHRVSTSVQIA--KIAALTVVASSF 249
HQP S +T+ PPS S+ +PP + R ++SV + ++ T+ SSF
Sbjct: 113 HQPPSSSTLATSSSPSLQPPSMSSSSLQPPASLREFFTSSVSYSHQPSSSSTLATSSF 170
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 550 QFVFVYFGLGMVECVVFEETGS 485
+FVF YFGLG V+ + E GS
Sbjct: 102 EFVFPYFGLGQVQLKLGELKGS 123
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 550 QFVFVYFGLGMVECVVFEETGS 485
+FVF YFGLG V+ + E GS
Sbjct: 314 EFVFPYFGLGQVQLKLGELKGS 335
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,079,369
Number of Sequences: 28952
Number of extensions: 275103
Number of successful extensions: 1357
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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