Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0331
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   2.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   3.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 37   LVPNSCSPGIH 5
            LVP +C+PG+H
Sbjct: 1229 LVPQNCAPGLH 1239


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 237 CGN*SNARCRYSNGGTCSTNKTDEDGCEVR 326
           C N    + RY+  GTC   +  E G +++
Sbjct: 62  CSNSPLRKARYTEKGTCKMGREIEVGYDLK 91


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 165 WSPVCGTCCHNYDPRDHGGIQI 230
           WS +   C     P+  GG+QI
Sbjct: 38  WSDIADVCERFLAPKGFGGVQI 59


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 165 WSPVCGTCCHNYDPRDHGGIQI 230
           WS +   C     P+  GG+QI
Sbjct: 37  WSDIADECERFLAPKGFGGVQI 58


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 165 WSPVCGTCCHNYDPRDHGGIQI 230
           WS +   C     P+  GG+QI
Sbjct: 38  WSDIADECERFLAPKGFGGVQI 59


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 515 RQRYHKELVPHTSLPEHVTRT 577
           RQR   +L P +SLP +  RT
Sbjct: 472 RQRTSPQLSPMSSLPPYPNRT 492


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 498 GCSNISDSGITRNWCRTHRCQST*LEPFHCIRECGGFHQSH 620
           GC + S      N  + H    T  +PF C +  G F + H
Sbjct: 220 GCEHCSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRH 260


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 408 GVTP*HSFHQRICYDSGWKIIQSV 479
           G+ P +SF +     S WK IQ V
Sbjct: 25  GIVPPYSFEKPDSQKSLWKKIQGV 48


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 408 GVTP*HSFHQRICYDSGWKIIQSV 479
           G+ P +SF +     S WK IQ V
Sbjct: 25  GIVPPYSFEKPDSQKSLWKKIQGV 48


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +3

Query: 57  NVPELENQLNKSCGVENKQNSNNVAKAAALNFIREHWS 170
           N P   N ++++  +  K + N+   +  +++ R +WS
Sbjct: 13  NAPVFNNYMDENQALGFKISDNSGINSQMIDYSRPNWS 50


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +3

Query: 57  NVPELENQLNKSCGVENKQNSNNVAKAAALNFIREHWS 170
           N P   N ++++  +  K + N+   +  +++ R +WS
Sbjct: 33  NAPVFNNYMDENQALGFKISDNSGINSQMIDYSRPNWS 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,543
Number of Sequences: 336
Number of extensions: 3295
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)