Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0330
(581 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51609| Best HMM Match : p450 (HMM E-Value=0) 33 0.13
SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05) 33 0.17
SB_6244| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_1738| Best HMM Match : p450 (HMM E-Value=0) 31 0.91
SB_51668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 30 1.6
SB_42553| Best HMM Match : VLPT (HMM E-Value=1) 29 2.1
SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_8405| Best HMM Match : PAN (HMM E-Value=0.044) 29 3.7
SB_8320| Best HMM Match : p450 (HMM E-Value=0) 28 6.4
SB_21442| Best HMM Match : p450 (HMM E-Value=0) 27 8.5
>SB_51609| Best HMM Match : p450 (HMM E-Value=0)
Length = 526
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 459 FKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFN 581
F P L L I G++WR+ R ++P F + LK + L N
Sbjct: 139 FSPPLDKMLTILPGEEWRNLRHALSPNFSAHKLKGMVPLMN 179
>SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05)
Length = 278
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 459 FKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFN 581
F P L L +G++WR+ R ++P F + LKS + L N
Sbjct: 16 FSPPLDKMLNALSGEEWRNLRHTLSPNFSAHKLKSMVPLMN 56
>SB_6244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 453 RFFKPWLGNGLLIS-TGQKWRSHRKLIAPTFHLNVLKSFIDLFN 581
RFF+ LG L+ +G W+ HR+LI+P F + D+ N
Sbjct: 97 RFFQNVLGQFSLVGLSGDLWKKHRRLISPFFGRTYMTFASDIAN 140
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 429 YIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFN 581
+ D+ + +P L + L I G++W+ R ++PTF + +KS + L N
Sbjct: 120 FYDRPVPFELPEP-LDSFLSIVRGERWKRIRNTLSPTFTAHNMKSMVPLIN 169
>SB_1738| Best HMM Match : p450 (HMM E-Value=0)
Length = 484
Score = 30.7 bits (66), Expect = 0.91
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +3
Query: 345 VVKIWIGPRLLVFLYDPRDVE--VILSSHVYIDKAEEYRFFKPW--LGNGLLISTGQKWR 512
V K++IG + + DP V+ VI H + ++ F KP + +G+ + G W+
Sbjct: 65 VHKMFIGRAAAIVVSDPEIVKQIVIKEFHKFPNRP---LFIKPNPPMDSGMFLGQGALWK 121
Query: 513 SHRKLIAPTFHLNVLKSFIDLFN 581
R + PTF LK + + +
Sbjct: 122 RIRTTLTPTFSTAKLKQIVPIID 144
>SB_51668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 491 DKKTVSEPWFEETVFLSFIDVNVTTQ 414
D T+++PW T+ F+D+N TQ
Sbjct: 44 DTYTITQPWISYTITQPFLDINTITQ 69
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 530 DKFTMRPPFLTSTDKKTVSEPWFEETVFLSFIDVNVTTQ 414
D +T+ P+++ T ++ PW T+ F+D+N TQ
Sbjct: 116 DTYTITQPWISYT----ITHPWISYTISQPFLDINTITQ 150
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 241 LQDFRYSGTPWNSS-VDLLTSSE-T*FRKALTTITNPSLRSG*DLVSSSFCTILATWKSS 414
L+ + Y+G N + DL S+ + KAL IT+ D+ S I T S
Sbjct: 2015 LRGWTYTGEALNQARADLFAKSKRSNVAKALIMITDGYSNDAVDVPSKKLRDIGVTVLSV 2074
Query: 415 *VVTFTSIKLRNTVSSNHGSETVF 486
V SIK NT++++ SE VF
Sbjct: 2075 GVGKHVSIKQLNTIATDPDSENVF 2098
>SB_42553| Best HMM Match : VLPT (HMM E-Value=1)
Length = 399
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 489 ISTGQKWRSHRKLIAPTFHLNVLK 560
I TG KWR HR L+ H LK
Sbjct: 322 IVTGDKWRDHRHLLPQELHWKFLK 345
>SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 509 PFLTSTDKKTVSEPWFEETVFLSF-IDVNVTTQDDFHVARIVQKDEETRSYPDLNDGF 339
PFL TDK SE + +E LS N F+V KD +TR PD ++ F
Sbjct: 255 PFLDITDKVLTSENYADERGLLSIEFHPNYVRNGKFYVYYSTFKDNKTR--PDNDEPF 310
>SB_8405| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 387
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 181 TPTGECQGGGCMSLLTN*MGLQDFRYSGTPWNSSVDLLT 297
T G C GGG ++ Q F YS WNS + T
Sbjct: 168 TDLGSCGGGGWTLVMKIDGNKQTFSYSSPKWNSMAEYQT 206
>SB_8320| Best HMM Match : p450 (HMM E-Value=0)
Length = 1207
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +3
Query: 375 LVFLYDPRDVEVILSSHVYIDKA------EEYRFFKPWLGNGLLISTGQKWRSHRKLIA 533
+V + DP DV+++L S K ++YR + + GL + G++W HR +++
Sbjct: 782 VVSISDPDDVQMVLRSESKFPKRSLLPLIDQYRQLRQ-VPPGLAFAVGEEWYKHRTVLS 839
>SB_21442| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 465 PWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDL 575
P L + + ++ KW+ RK+IAP F + LK + L
Sbjct: 121 PPLDSEMFLAKYPKWKRVRKVIAPAFSGSKLKGTVGL 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,265,114
Number of Sequences: 59808
Number of extensions: 336271
Number of successful extensions: 916
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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