Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0328
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 319  LMCVKQKCNDDKKNLMSI 372
            ++C  QK  D+K +L++I
Sbjct: 1120 MLCTHQKAGDEKASLINI 1137


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 319  LMCVKQKCNDDKKNLMSI 372
            ++C  QK  D+K +L++I
Sbjct: 1120 MLCTHQKAGDEKASLINI 1137


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 319  LMCVKQKCNDDKKNLMSI 372
            ++C  QK  D+K +L++I
Sbjct: 1120 MLCTHQKAGDEKASLINI 1137


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 319  LMCVKQKCNDDKKNLMSI 372
            ++C  QK  D+K +L++I
Sbjct: 1120 MLCTHQKAGDEKASLINI 1137


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 212 IYVRNDYNK*NNLRSYFIMTIKLKNELSRNLAIKYC 319
           IY +  Y K   +  YFI+ I +   L+ ++ +  C
Sbjct: 28  IYHKEKYRKFCRILKYFIIAIYVLTILTSSVTLHVC 63


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 430 YVFS*DVYVTYPI*TVFFVVHNFV 501
           Y F+  VY  +P+  + F+ + F+
Sbjct: 182 YCFNSSVYKVFPVEHLLFIANAFI 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,685
Number of Sequences: 336
Number of extensions: 3168
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)