Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0327
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   3.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 451 RRSLFSMSRETRCVFSI--DSTH*SSLRYTH 537
           +R L  + +E RC+FS+    TH    +YTH
Sbjct: 270 KRKLIHLLQEYRCIFSLRPGLTH----KYTH 296


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 348 NLDKLLISEKRSLLPES 398
           N D L+++E RS  PES
Sbjct: 429 NFDALIVNEMRSEKPES 445


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 348 NLDKLLISEKRSLLPES 398
           N D L+++E RS  PES
Sbjct: 321 NFDALIVNEMRSEKPES 337


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 415 EYYPSPLSGSKLRFSD 368
           EYYP P      RFSD
Sbjct: 401 EYYPDPEKYDPERFSD 416


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,262
Number of Sequences: 336
Number of extensions: 3191
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)