Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0327
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 106 2e-23
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 99 2e-21
SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39) 81 9e-16
SB_25835| Best HMM Match : CAP_GLY (HMM E-Value=2.9e-32) 72 3e-13
SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28) 71 7e-13
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 71 9e-13
SB_4343| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-19) 55 5e-08
SB_4005| Best HMM Match : CAP_GLY (HMM E-Value=5.8e-17) 48 6e-06
SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15) 41 9e-04
SB_31088| Best HMM Match : CAP_GLY (HMM E-Value=2.2e-37) 37 0.014
SB_47332| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0) 29 3.7
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 29 3.7
SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4) 28 4.9
SB_7570| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_59790| Best HMM Match : VWA (HMM E-Value=0) 27 8.6
SB_29744| Best HMM Match : Kinesin (HMM E-Value=6.3e-30) 27 8.6
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 106 bits (254), Expect = 2e-23
Identities = 47/89 (52%), Positives = 66/89 (74%)
Frame = +2
Query: 311 FIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 490
F +G+RV V TKPG IA++GET+FA G+WAGI+LD+P GKNDGSVAG +YF+C GV
Sbjct: 156 FQVGDRVLVNNTKPGVIAFLGETKFAKGDWAGIILDDPTGKNDGSVAGEKYFECKPLHGV 215
Query: 491 FSRLTRLTRVPFAIHTPHDASPVSDAGSV 577
F++L ++T+V +P SPV ++ S+
Sbjct: 216 FTKLEKITKVNQVTESP--GSPVENSSSL 242
Score = 91.9 bits (218), Expect = 4e-19
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = +2
Query: 296 EDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCP 475
E++ S IG+RV V G K G + Y+G T+FA GEWAG+ LDEP+GKNDG+VAG RYFQC
Sbjct: 237 ENSSSLEIGDRVVVSGNKIGTLRYVGTTEFAKGEWAGVELDEPLGKNDGAVAGTRYFQCI 296
Query: 476 EKRGVFSRLTRLTR 517
+ G+F+ + ++ +
Sbjct: 297 QGYGLFAPVHKVIK 310
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 99.1 bits (236), Expect = 2e-21
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = +2
Query: 296 EDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCP 475
+D + IGERV++GGTK G + + G T+FA GEW G+ LD+P+GKNDGSV GV+YFQC
Sbjct: 385 QDANELTIGERVYIGGTKSGVLRFCGRTEFASGEWVGVELDQPVGKNDGSVDGVQYFQCE 444
Query: 476 EKRGVFSRLTRLTR 517
G+F+ +++TR
Sbjct: 445 PNHGIFAPASKVTR 458
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +2
Query: 293 TEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQC 472
+E F IGE V V G KPG + +IG+TQFA G W GI L P+GKNDGSV GVRYF C
Sbjct: 515 SEIARDFQIGEHVLVAGQKPGIVQFIGQTQFASGWWLGIELSNPVGKNDGSVGGVRYFTC 574
Query: 473 PEKRGVFSRLTRLTRVP 523
+ GVF+ + ++T+ P
Sbjct: 575 KPRFGVFAPVAKVTKNP 591
>SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39)
Length = 246
Score = 80.6 bits (190), Expect = 9e-16
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Frame = +2
Query: 296 EDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRY 463
+D ++ +G R V V G P G++ ++G T F PG W GI DEP+GKNDGSVAG RY
Sbjct: 153 KDAEAIPVGSRCEVKVAGAPPKRGEVMFVGTTDFKPGYWVGIKYDEPLGKNDGSVAGKRY 212
Query: 464 FQCPEKRGVFSR 499
FQCP K G F R
Sbjct: 213 FQCPPKYGGFVR 224
>SB_25835| Best HMM Match : CAP_GLY (HMM E-Value=2.9e-32)
Length = 640
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +2
Query: 317 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 496
+G + VG K G I +IG T+F+PG W G+ LD+ GKNDGSV+GVRYF C + G F
Sbjct: 472 VGMAIEVGKGKTGVIRFIGATEFSPGPWVGVELDKAGGKNDGSVSGVRYFACKPRFGSFV 531
Query: 497 R 499
R
Sbjct: 532 R 532
>SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28)
Length = 834
Score = 70.9 bits (166), Expect = 7e-13
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2
Query: 347 KPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 493
+ G + + G T F+PGEW GIVLD+ GKNDGSV GVRYF C + G+F
Sbjct: 250 RTGLLQFTGTTHFSPGEWCGIVLDDACGKNDGSVKGVRYFDCKQDHGIF 298
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 70.5 bits (165), Expect = 9e-13
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = +2
Query: 353 GQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAI 532
G +AY+G TQFA G+W G+VLDE GKNDG+V G YF C + G+F R +++ +
Sbjct: 4 GTVAYVGATQFATGKWIGVVLDEKKGKNDGTVQGKEYFSCEDGYGIFVRQSQIIVLDSNT 63
Query: 533 HTP 541
TP
Sbjct: 64 STP 66
>SB_4343| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-19)
Length = 898
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 272 QTTAVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGK-NDGSV 448
+ T+ + F G+RV + G G + ++G T+ G+W GI +D+ + + ++GS
Sbjct: 51 RNTSATKKSEVQKFNTGDRVHLRGYI-GTVKFVGATELGQGDWVGIEMDKELNQGHNGSY 109
Query: 449 AGVRYFQCPEKRGVFSR 499
G++YF C K GVF+R
Sbjct: 110 EGIQYFFCKPKHGVFAR 126
>SB_4005| Best HMM Match : CAP_GLY (HMM E-Value=5.8e-17)
Length = 560
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 320 GERVWVGGTKPGQIAYIGETQFAPGEWAGIVLD--EPIGKNDGSVAGVRYFQCPEKRGVF 493
G+RV V G G + ++G T G W GI LD +P G N GS YFQC K G+F
Sbjct: 86 GDRVHVRGYV-GTVKFVGCTSLGEGVWVGIALDKQQPQG-NSGSHQETSYFQCQPKHGLF 143
Query: 494 SRLTRLTRVPFAIHTPHDASPVSDAGSV 577
+R P +H D +S +
Sbjct: 144 AR-------PGVVHPHSDVDMISKTSEI 164
>SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15)
Length = 280
Score = 40.7 bits (91), Expect = 9e-04
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 392 GEWAGIVLDEPI-GKNDGSVAGVRYFQC 472
GEW G+ D+P GK+DGS+ GV+YF+C
Sbjct: 188 GEWYGVEWDDPKRGKHDGSIDGVKYFEC 215
>SB_31088| Best HMM Match : CAP_GLY (HMM E-Value=2.2e-37)
Length = 947
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 329 VWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTR 508
VW G P + + P + G E +G +DG+ RYF CPE GVF L +
Sbjct: 135 VWFKGPLPTHDGTMFGVELTPNKPKG---SEQLGTSDGTFREKRYFTCPENCGVFVALDK 191
Query: 509 L 511
+
Sbjct: 192 I 192
Score = 35.1 bits (77), Expect = 0.043
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 353 GQIAYIGETQFAPGEW-AGIVLDEP-IGKNDGSVAGVRYFQCPEKRGVF 493
G I +IG+ + AG+ L+E G +DG+ G RYF+CP RG F
Sbjct: 572 GVIRWIGQLAELKNKLVAGLELEEEQSGCSDGTFKGKRYFECPPGRGFF 620
>SB_47332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 323 ERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDE 421
E +W G G + Y G PGEW GI LD+
Sbjct: 14 EVLWRGEVCKGAVRYTGMLVAKPGEWIGIELDD 46
>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 401 AGIVL--DEPIGKNDGSVAGVRYFQCPEKRGVFSRL 502
AG+ L D+ +G N G+ GVRYF KRG F RL
Sbjct: 519 AGVELSTDDRLGTN-GTYRGVRYFVTTPKRGYFFRL 553
>SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2631
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 187 VETKISFSDGSSTDTLRKLSDDLSRKHLSDHSG 285
+ETKI DG D RK DD + HSG
Sbjct: 2401 IETKIGAKDGDVLDIFRKGPDDFECRVSPKHSG 2433
>SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0)
Length = 485
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 427 NWLVEYYPSPLSGSKLRFSDISNLSRFRT 341
+WL+ PSP+S S + +SD +R+RT
Sbjct: 234 HWLLRSTPSPMSASSVAYSDDVFRNRWRT 262
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 34 RHTRPAHLHHAGRHQGRHTPRYNH 105
RH H HH RH+ RH R+ H
Sbjct: 316 RHHHHHHHHHHQRHRHRHRHRHRH 339
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 37 HTRPAHLH-HAGRHQGRHTPRYNHKLRFPNFKSRTNSIIQRNF 162
H R H H H RH H YN + R+ + T II+ +F
Sbjct: 326 HQRHRHRHRHRHRHHHHHHHEYNRRHRYFTDINITIQIIRHHF 368
>SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4)
Length = 177
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 52 HLHHAGRHQGRHTPRYNHKLRFPNFKSRTNSI 147
HL+H +HQ H ++H+ ++ TN+I
Sbjct: 74 HLYHDQQHQWNHQHHHHHQYHHRHYSIMTNNI 105
>SB_7570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 52 HLHHAGRHQGRHTPRYNHKLRFPNF 126
H H RH+ RH R+ H+LR ++
Sbjct: 1 HHRHRHRHRHRHRHRHRHRLRHRHY 25
>SB_59790| Best HMM Match : VWA (HMM E-Value=0)
Length = 4151
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 154 RNFFFENHKMPVETKISFSDGSSTDTLRKLSDDLSRKHLSDHSGDIDRGHR 306
R F + + +DG S+D + K S +L +KH+ + I +G+R
Sbjct: 2215 RRLFLRQPRGRKSVLVVLTDGISSDRVSKASRELHQKHVKVIALGIGKGYR 2265
>SB_29744| Best HMM Match : Kinesin (HMM E-Value=6.3e-30)
Length = 291
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 461 YFQCPEKRGVFSRLTRLTR 517
YF C E VF+R+T LTR
Sbjct: 229 YFDCDEDDDVFTRVTNLTR 247
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,701,945
Number of Sequences: 59808
Number of extensions: 422716
Number of successful extensions: 1174
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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