Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0327
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 41 8e-04
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 5.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 5.8
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical
protein F53F4.3 protein.
Length = 229
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Frame = +2
Query: 296 EDTDSFIIGER--VWVGG--TKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRY 463
E + ++G R V VG + G++AY+G T+F G W G+ DEP+GKNDGSVAGVRY
Sbjct: 141 EAAKNIMVGNRCEVTVGAQMARRGEVAYVGATKFKEGVWVGVKYDEPVGKNDGSVAGVRY 200
Query: 464 FQCPEKRGVFSR 499
F C K G F R
Sbjct: 201 FDCDPKYGGFVR 212
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +2
Query: 308 SFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRG 487
SF IG RV G++ + G+TQFA G+W G++LD GKN+G+V V+YF+C G
Sbjct: 2 SFEIGTRVKTSSGN-GRVVFCGQTQFAEGDWVGVILDTATGKNNGTVQNVQYFECEPNFG 60
Query: 488 VF 493
VF
Sbjct: 61 VF 62
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 317 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 496
IG V V G + Y+G G + GI L EP GK+DG+ GV YF G+F+
Sbjct: 21 IGRLVDVVNVGKGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFA 80
Query: 497 RLTRLT 514
+ R+T
Sbjct: 81 PIFRVT 86
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 317 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 496
IG V V G + Y+G G + GI L EP GK+DG+ GV YF G+F+
Sbjct: 21 IGRLVDVVNVGKGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFA 80
Query: 497 RLTRLT 514
+ R+T
Sbjct: 81 PIFRVT 86
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 317 IGERVWVGGTKPGQIAYIGETQ-FAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 487
IG+RV + + + YIGE + W G+ D+P GK+DG V G RYFQ G
Sbjct: 3 IGQRVRIN-FEVATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNG 60
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Frame = -1
Query: 478 LWTLKITNACH*SIVFTN-----WLVEYYPSPLSGSKLRFSDIS-NLSRFRTAYPNTFTN 317
LW++K TNA ++ F N + YY S+ F+ S ++++F FT
Sbjct: 310 LWSIKTTNANQLAVAFHNGGSNIHIARYYDGTKFNSRGAFAATSPSMTQFHNLNTPFFTR 369
Query: 316 --NEAIGVLCQYHRCGLIGV 263
N+ I + C C I +
Sbjct: 370 NANDTIEIYCTVLSCSSITI 389
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Frame = -1
Query: 478 LWTLKITNACH*SIVFTN-----WLVEYYPSPLSGSKLRFSDIS-NLSRFRTAYPNTFTN 317
LW++K TNA ++ F N + YY S+ F+ S ++++F FT
Sbjct: 310 LWSIKTTNANQLAVAFHNGGSNIHIARYYDGTKFNSRGAFAATSPSMTQFHNLNTPFFTR 369
Query: 316 --NEAIGVLCQYHRCGLIGV 263
N+ I + C C I +
Sbjct: 370 NANDTIEIYCTVLSCSSITI 389
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Frame = -1
Query: 478 LWTLKITNACH*SIVFTN-----WLVEYYPSPLSGSKLRFSDIS-NLSRFRTAYPNTFTN 317
LW++K TNA ++ F N + YY S+ F+ S ++++F FT
Sbjct: 310 LWSIKTTNANQLAVAFHNGGSNIHIARYYDGTKFNSRGAFAATSPSMTQFHNLNTPFFTR 369
Query: 316 --NEAIGVLCQYHRCGLIGV 263
N+ I + C C I +
Sbjct: 370 NANDTIEIYCTVLSCSSITI 389
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 25 RFQRHTRPAHLHHAGRHQGRHTPRYNH 105
R H P H HH GR RH ++H
Sbjct: 393 RHGHHGPPHHHHHDGRSPSRHGHHHHH 419
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 QRHTRPAHLHHAGRHQGRH 87
++H R H HH G H G H
Sbjct: 126 KKHGRKEHDHHHGHHHGHH 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,379,188
Number of Sequences: 27780
Number of extensions: 307334
Number of successful extensions: 880
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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