Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0327
(595 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 24 0.98
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.0
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 3.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 3.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 3.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 3.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 3.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 3.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 3.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 3.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 3.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 3.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 3.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 3.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 3.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 3.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 3.9
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 5.2
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 6.9
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 24.2 bits (50), Expect = 0.98
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 34 RHTRPAHLHHAGRHQGRHTPRYN 102
R T P+ +GR + R TPRYN
Sbjct: 397 RQTPPSR-KESGRRRRRRTPRYN 418
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 187 VETKISFSDGSSTDTLRKLSDDLSRKHLSDHS 282
+ T + S GSS D R LS+ + SD+S
Sbjct: 1312 IATNTTVSSGSSEDHRRPLSEHIYSSIDSDYS 1343
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYR 139
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYR 139
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYR 139
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYR 139
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYR 139
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYR 139
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYR 139
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYR 388
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYR 388
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYR 388
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYR 388
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYR 388
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYR 388
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 365 PGSRHIGPLTPFPPRFIPPDMYR 387
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 350 PGSRHIGPLTPFPPRFIPPDMYR 372
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 393 PGANCVSPI*AICPGFVPPTQTR 325
PG+ + P+ P F+PP R
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYR 388
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 464 FQCPEKRGVFSRLTRLTRVPFAIHTPHDASPV 559
F+C + + LTRL R +HT P+
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPI 34
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +2
Query: 356 QIAYIGETQFAPGEWAGIVLDEP 424
+ AY+G+ EW DEP
Sbjct: 531 EFAYLGKPTKEDSEWPSYSRDEP 553
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,982
Number of Sequences: 438
Number of extensions: 3677
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -