Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0324
         (608 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1ZPF4 Cluster: Sensor protein; n=1; Microscilla marina...    35   1.3  
UniRef50_A4AXX5 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_Q969A3 Cluster: Complement component C6; n=1; Branchios...    33   5.3  
UniRef50_UPI0000E4913D Cluster: PREDICTED: similar to Usp40 prot...    32   9.3  

>UniRef50_A1ZPF4 Cluster: Sensor protein; n=1; Microscilla marina
           ATCC 23134|Rep: Sensor protein - Microscilla marina ATCC
           23134
          Length = 2102

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -1

Query: 404 KKYCLFFPFNLILFTFINAVLYASSQSRSNLRL*ITRLKSRQKIWDLNSLFLLI 243
           +KY +F    +I   F N +L+A      +LR  + +L+ +QKI  LN L  L+
Sbjct: 2   RKYKIFVRITIIALFFFNHLLFAQVAGEDSLRKLLPKLQGKQKIRALNHLAYLL 55


>UniRef50_A4AXX5 Cluster: Putative uncharacterized protein; n=1;
           Alteromonas macleodii 'Deep ecotype'|Rep: Putative
           uncharacterized protein - Alteromonas macleodii 'Deep
           ecotype'
          Length = 135

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 538 IYKFKKPLPHLDSYFPQPFTGASGSKVPRLLS 443
           I K ++P+P+L   FPQPF    GS+ P L S
Sbjct: 104 ITKQRRPIPYLCPTFPQPFVQTVGSRAPPLFS 135


>UniRef50_Q969A3 Cluster: Complement component C6; n=1;
           Branchiostoma belcheri|Rep: Complement component C6 -
           Branchiostoma belcheri (Amphioxus)
          Length = 921

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 489 NPSPAHRGQKCPGCCRVTEAIIAHNCILQ 403
           NP+P + GQ CPG    TE   +H C+ Q
Sbjct: 603 NPTPRNNGQTCPGQDSETETCNSHPCLTQ 631


>UniRef50_UPI0000E4913D Cluster: PREDICTED: similar to Usp40 protein;
            n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
            similar to Usp40 protein - Strongylocentrotus purpuratus
          Length = 1301

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 9    GGGALN*WIPGLQETSILLKISSAQSDNSD 98
            GGG ++ W+P +Q  +IL  +SSA S N D
Sbjct: 997  GGGGVSSWMPHVQFANILNSLSSANSPNHD 1026


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,637,031
Number of Sequences: 1657284
Number of extensions: 10148270
Number of successful extensions: 25030
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25014
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)