Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0324
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    27   0.16 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 13/64 (20%), Positives = 31/64 (48%)
 Frame = -1

Query: 431 RLLRITVYCKKYCLFFPFNLILFTFINAVLYASSQSRSNLRL*ITRLKSRQKIWDLNSLF 252
           +++++  YC   CL +      F   + V   +SQ   + ++ +  +    ++ D  SL+
Sbjct: 211 KIIQVVPYCYINCLIYLIGGFWFMQCDVVGKVASQLAEDFQMALKHVGPSSQVADYRSLW 270

Query: 251 LLIS 240
           +L+S
Sbjct: 271 MLLS 274


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 357 KSEQNEIKREKQAVFFAVYSY 419
           +S   +IKR+++  F+ +Y Y
Sbjct: 25  RSIDEKIKRQERHSFYKIYKY 45


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 136 NNVHGSAVSVNVP 98
           NN+HG A SV  P
Sbjct: 234 NNIHGMAPSVMYP 246


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 136 NNVHGSAVSVNVP 98
           NN+HG A SV  P
Sbjct: 182 NNIHGMAPSVMYP 194


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 136 NNVHGSAVSVNVP 98
           NN+HG A SV  P
Sbjct: 365 NNIHGMAPSVMYP 377


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,880
Number of Sequences: 336
Number of extensions: 2736
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)