BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0323
(605 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 26 0.28
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 26 0.28
EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport pe... 25 0.50
EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport pe... 25 0.50
AF264718-1|AAF75271.1| 125|Tribolium castaneum putative cytochr... 25 0.65
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 24 1.1
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 3.5
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 21 6.1
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 6.1
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 6.1
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 8.1
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 21 8.1
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 25.8 bits (54), Expect = 0.28
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +3
Query: 270 LAEEDSCYQNVDQGCRRTL----SLPHCSAYYGQFKD 368
L E NVD G R L S PHC YG F D
Sbjct: 68 LTENCDYIHNVDCGDRTQLEPPISSPHCERLYGIFAD 104
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 25.8 bits (54), Expect = 0.28
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +3
Query: 270 LAEEDSCYQNVDQGCRRTL----SLPHCSAYYGQFKD 368
L E NVD G R L S PHC YG F D
Sbjct: 68 LTENCDYIHNVDCGDRTQLEPPISSPHCERLYGIFAD 104
>EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport
peptide isoform C protein.
Length = 136
Score = 25.0 bits (52), Expect = 0.50
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 171 DVCRKYCLYTHWRRRRLPTMTRLDENVRTQ 82
++CRK C T + + + T+ R DE + Q
Sbjct: 83 NLCRKNCFTTDYFKGCIDTLQRSDEEAQIQ 112
>EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport
peptide isoform A protein.
Length = 140
Score = 25.0 bits (52), Expect = 0.50
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 171 DVCRKYCLYTHWRRRRLPTMTRLDENVRTQ 82
++CRK C T + + + T+ R DE + Q
Sbjct: 83 NLCRKNCFTTDYFKGCIDTLQRSDEEAQIQ 112
>AF264718-1|AAF75271.1| 125|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q6 protein.
Length = 125
Score = 24.6 bits (51), Expect = 0.65
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 419 TFLPLSPVGLLLQQLPDEQARIREALXEIIGR 514
T + +S + L L L D Q ++RE + ++G+
Sbjct: 1 TSMAISFILLTLANLQDIQTKVREEILSVVGK 32
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 23.8 bits (49), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 228 KVYALIVACLALGVLAEEDSCYQNVD 305
KV ++ AC+ V AEE + QN+D
Sbjct: 3 KVLFVVFACVQAYVYAEEYTVPQNID 28
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 3.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 342 SAYYGQFKDNHVVANELKALASLYLKRSYHYLLSASYFNNYQT 470
S Y Q H++ + + YL Y +L FNNYQ+
Sbjct: 481 SNYTKQQSKIHLIVRSV--FVTTYLMFDYCTVLRVQRFNNYQS 521
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.4 bits (43), Expect = 6.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 192 EKITSAFDVCRKYCLYTH 139
+ I DVC+KY L+ H
Sbjct: 301 DPIEKIADVCQKYKLWLH 318
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 VYALIVACLALGVLAEEDSCYQNVD 305
V+ L +ACL V ++E QN+D
Sbjct: 5 VFLLALACLKTYVSSQEYLVPQNID 29
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 231 VYALIVACLALGVLAEEDSCYQNVD 305
V+ L +ACL V ++E QN+D
Sbjct: 5 VFLLALACLKTYVSSQEYLVPQNID 29
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 117 LEVAFCASVCKGSTFDIRQTHLLFFREFATK 209
LE+ +VC+ + + ++T L +R TK
Sbjct: 291 LEILITVTVCELTILEYKRTKKLLYRIPVTK 321
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 117 LEVAFCASVCKGSTFDIRQTHLLFFREFATK 209
LE+ +VC+ + + ++T L +R TK
Sbjct: 116 LEILITVTVCELTILEYKRTKKLLYRIPVTK 146
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,229
Number of Sequences: 336
Number of extensions: 2981
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -