Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0323
         (605 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    31   0.59 
At5g17220.1 68418.m02018 glutathione S-transferase, putative           30   1.4  
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    29   1.8  
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ...    29   3.2  
At2g44630.1 68415.m05555 kelch repeat-containing F-box family pr...    29   3.2  
At5g20600.1 68418.m02446 expressed protein                             28   4.2  
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ...    28   5.5  
At2g06200.1 68415.m00682 expressed protein                             28   5.5  
At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-rela...    27   7.3  
At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing...    27   7.3  
At1g68670.1 68414.m07846 myb family transcription factor contain...    27   7.3  
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin...    27   9.6  
At4g37330.1 68417.m05287 cytochrome P450 family protein                27   9.6  
At4g35910.1 68417.m05103 expressed protein                             27   9.6  
At1g13300.1 68414.m01544 myb family transcription factor contain...    27   9.6  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +3

Query: 423 SYHYLLSASYFNNYQTNRQGFAKLFXKLSDDSWEKTIGLIKHVTKRGGKMDFSS 584
           SY Y    +YF+      +G AK F + S +  E    L+++  KRGG++   S
Sbjct: 112 SYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQS 165


>At5g17220.1 68418.m02018 glutathione S-transferase, putative
          Length = 214

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 348 YYGQFKDNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNRQGFAKLFXKLSD-DSWE 524
           Y  +   N  +A E   +A L    +  YL+S +  N     R  F + + ++SD  SW+
Sbjct: 147 YNNRLSSNRFLAGEEFTMADLTHMPAMGYLMSITDINQMVKARGSFNRWWEEISDRPSWK 206

Query: 525 KTIGLIKH 548
           K + L  H
Sbjct: 207 KLMVLAGH 214


>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 423 SYHYLLSASYFNNYQTNRQGFAKLFXKLSDDSWEKTIGLIKHVTKRGGKM 572
           SY Y    +YF+      +G AK F + S +  E    L+++  KRGG++
Sbjct: 110 SYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRV 159


>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
           subunit cowpea2 precursor GI:2970654 (Vigna
           unguiculata); contains Pfam profile PF00210:
           Ferritin-like domain
          Length = 253

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 423 SYHYLLSASYFNNYQTNRQGFAKLFXKLSDDSWEKTIGLIKHVTKRGGKMDFSS 584
           SY Y    +YF+      +GFAK F   S +        +++  KRGG++   S
Sbjct: 104 SYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQS 157


>At2g44630.1 68415.m05555 kelch repeat-containing F-box family
           protein similar to SKP1 interacting partner 6
           [Arabidopsis thaliana] GI:10716957; contains Pfam
           profiles PF00646: F-box domain, PF01344: Kelch motif
          Length = 372

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 384 NELKALASLYLKRSYHYLLSASYFNNYQTNRQGFAKLFXKLSDDSWEKT 530
           NE    AS+ L R  + L S  Y N+Y T R G  + +  + +D+W KT
Sbjct: 218 NEWFTHASVSLDRKVYALNSREYMNSYDT-RDGSYQRY-TIPEDNWWKT 264


>At5g20600.1 68418.m02446 expressed protein
          Length = 532

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -1

Query: 563 TPLSDVLYETNGFLPRIVR*FXEELRESLPVRLVVVEV 450
           T L+D  ++ NG    I   F EELR  LP+R  V+E+
Sbjct: 159 TLLADDKFQGNGVNYHITSAFVEELRPFLPLRKEVLEL 196


>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
            contains Pfam profile: PF02364 1,3-beta-glucan synthase;
            contains non-consensus splice aite AC at exon 33
          Length = 1959

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 453  FNNYQTNRQGFAKLFXKLSDDSWEKTIGLIKHVTKRG 563
            +N +  NR G      K  +  WEK IG ++H  KRG
Sbjct: 1729 WNKWIYNRGGIGVPPEKSWESWWEKEIGHLRHSGKRG 1765


>At2g06200.1 68415.m00682 expressed protein
          Length = 244

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 565 PPLLVTCFMRPMVFSHESSDNFXKSFANPCL 473
           PP L+    RP +FS  SS +   SF +P L
Sbjct: 32  PPHLLFLIKRPFLFSSSSSSSSSSSFFSPTL 62


>At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-related
           low similarity to RING-H2 zinc finger protein ATL4
           [Arabidopsis thaliana] GI:4928399
          Length = 174

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 69  TICCLGCGRFHLDESLLEVAFCASV 143
           ++CC+  G F L E L+E+  C  +
Sbjct: 103 SLCCVCLGEFELKEELVEMPLCKHI 127


>At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing
           protein low similarity to NUC-2 [Neurospora crassa]
           GI:1399532, xenotropic and polytropic murine leukemia
           virus receptor [Mus musculus castaneus] GI:6093320;
           contains Pfam profile PF03105: SPX domain
          Length = 287

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 504 LSDDSWEKTIGLIKHVTK 557
           L DDSW+K +G+++ V K
Sbjct: 270 LEDDSWKKKVGVLEQVAK 287


>At1g68670.1 68414.m07846 myb family transcription factor contains
           Pfam domain, PF00249: Myb-like DNA-binding domain
          Length = 354

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +2

Query: 374 RCSERTEGI-SLTVFETFLPLSPVGLLLQQLPDEQ 475
           +CSE+T  +    VFE F+P+  +  L +++ +E+
Sbjct: 63  QCSEQTTSVCGGPVFEEFIPIKKISSLCEEVQEEE 97


>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
           [Arabidopsis thaliana] GI:1246401, GI:8163920
          Length = 255

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
 Frame = +3

Query: 291 YQNVDQGCRRTLSLP---HCSAYYGQFKD-NHVVANELKALASLYLKRSYHYLLSASYFN 458
           +Q  ++  +  L++P   H S    +F D +  V NE     ++    SY Y    +YF+
Sbjct: 64  FQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQ---INVEYNVSYVYHSMYAYFD 120

Query: 459 NYQTNRQGFAKLFXKLSDDSWEKTIGLIKHVTKRGGKM 572
                 +G AK F + S++        +++  +RGG++
Sbjct: 121 RDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRV 158


>At4g37330.1 68417.m05287 cytochrome P450 family protein
          Length = 492

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +3

Query: 363 KDNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNRQ 479
           K++ V+AN  K   S +L  +  YLLSASY ++++  R+
Sbjct: 93  KNDVVLANRPKFTISKHLGYNATYLLSASYGDHWRNLRR 131


>At4g35910.1 68417.m05103 expressed protein
          Length = 458

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 392 EGISLTVFETFLPLSPVGLLLQQLPDEQARIREALXEII 508
           +G SL  F +FLP   +  +  Q  D QA +RE + + +
Sbjct: 412 DGSSLEQFSSFLPDHMISQVKHQKVDSQAYLREKIKDCL 450


>At1g13300.1 68414.m01544 myb family transcription factor contains
           Pfam domain, PF00249: Myb-like DNA-binding domain
          Length = 344

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 365 GQPRCSERTEGISLTVFETFLPL 433
           GQP CSE+T G    V E FL +
Sbjct: 66  GQPECSEQTTGECGPVLEQFLTI 88


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,039,886
Number of Sequences: 28952
Number of extensions: 269056
Number of successful extensions: 677
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)