Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0320
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.3  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   9.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 216 KGK-AKFDAWHKLAGTSKEDAQKA 284
           +GK AK   W K+AG  +ED + A
Sbjct: 460 RGKNAKDVDWQKIAGAVEEDDEDA 483


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 505 DFIKLSCSYINERYFQGAK 561
           D +K SC+   ++  QGAK
Sbjct: 68  DALKTSCAKCTDKQKQGAK 86


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 143 VKELGISWKSFQVLH 99
           V+E+ + WKSF+ ++
Sbjct: 56  VQEIRLEWKSFRFVY 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,246
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)