Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0319
(597 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 91 9e-20
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 44 2e-05
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 43 3e-05
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 43 4e-05
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 37 0.003
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 31 0.097
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 31 0.13
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 29 0.39
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 29 0.68
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 27 2.7
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 2.7
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 26 3.6
SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12 |Schiz... 26 3.6
SPAP27G11.02 |||TPR repeat protein, unknown biological role|Schi... 26 3.6
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 26 4.8
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 26 4.8
SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomy... 25 6.3
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 25 8.4
SPAC7D4.09c |||steroid dehydrogenase |Schizosaccharomyces pombe|... 25 8.4
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 25 8.4
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 25 8.4
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 25 8.4
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 91.5 bits (217), Expect = 9e-20
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Frame = +2
Query: 35 EWMRQLLNLVRAVELNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPRC 214
E+ + + +++ L+ F ++IQ A Y+ A+ + FE +RFP
Sbjct: 430 EFAEAISDYQKSIALDDSFIYSHIQLGVAQYK-------THAIAESMKTFEDCKKRFPNS 482
Query: 215 AEAYILYAQVLSDQQEWGRAEALFDAALAVDPN------NATLYVHKGLVQLQKSTDFDK 376
+E Y + ++L DQQ++ A FD A+ ++ +A ++K L Q D +
Sbjct: 483 SEVYNYFGEILLDQQKFDDAVKNFDHAIELEKREHLTIMSAMPLINKALAVFQWKKDISQ 542
Query: 377 AVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIALAKTELEMTHLFSLKD 556
A L +A+ D +CD A ++ +Q+G R +LE FEK+ LA+TE EM + FS +
Sbjct: 543 AENLCRQALSADPECDIAIASMAQFLLQQGKAREALEYFEKSAQLARTESEMVNAFSYAE 602
Query: 557 AAAAQLKVSERW 592
A Q+ ++E++
Sbjct: 603 ATRTQIALTEKY 614
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 43.6 bits (98), Expect = 2e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +2
Query: 281 LFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQ 460
L+ A+ +D NA LY ++ L L KS D+ A+ +KAIE D + AY T +
Sbjct: 27 LYTKAIELDSTNAILYSNRSLAHL-KSEDYGLAINDASKAIECDPEYAKAYFRRATAHIA 85
Query: 461 RGNLRRSLELFEKAIALAKTE 523
+ ++ F KA+ALA ++
Sbjct: 86 IFQPKEAVGDFRKALALAPSD 106
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 43.2 bits (97), Expect = 3e-05
Identities = 29/109 (26%), Positives = 54/109 (49%)
Frame = +2
Query: 173 RADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQL 352
R +FE A+ R ++ Y Q DQ+E+ RA ++F+ AL VD L++ K +
Sbjct: 56 RKEFEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERALDVDSTYIPLWL-KYIECE 114
Query: 353 QKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEK 499
K+ + + A L ++A+ + D + +E GN+ ++FE+
Sbjct: 115 MKNRNINHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFER 163
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 42.7 bits (96), Expect = 4e-05
Identities = 38/175 (21%), Positives = 75/175 (42%)
Frame = +2
Query: 17 CIYY*REWMRQLLNLVRAVELNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESAL 196
C RE + L + RA++L+P F AY + + + + K+ + F A+
Sbjct: 440 CFSLQREHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKS-------KTSFRKAI 492
Query: 197 ERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDK 376
R A+ V +A+ F A ++PNN+ L G++ ++ D+ K
Sbjct: 493 RVNVRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMI-YERCKDYKK 551
Query: 377 AVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIALAKTELEMTHL 541
A+ ++A ++D+K A + + + ++L E+ A+A E + L
Sbjct: 552 ALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAIAPDEANVHFL 606
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 36.7 bits (81), Expect = 0.003
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 284 FDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQR 463
+D LA DP N + KGLVQ++ + + AVK + ++ D + D + L +
Sbjct: 453 YDILLAADPRNYHALLGKGLVQIE-NEQYSDAVKTLGLLLD-DHENDPSLSELSWCYFKT 510
Query: 464 GNLRRSLELFEKAI 505
GNL +++ EK +
Sbjct: 511 GNLPKAISTVEKCL 524
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/81 (20%), Positives = 34/81 (41%)
Frame = +2
Query: 284 FDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQR 463
F +AL + P + + G +S + A+K N+A +D + + T+E
Sbjct: 673 FQSALRISPKDTNAWSGLGEAYA-RSGRYVSALKAFNRASILDPDDWYVKYFIATLEKDM 731
Query: 464 GNLRRSLELFEKAIALAKTEL 526
G ++ + +A+ EL
Sbjct: 732 GEYEVAVSTLSEILAVRSKEL 752
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 31.5 bits (68), Expect = 0.097
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 365 DFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLE 487
+FD+A KL + + +D+ A++ LG QRGN R ++E
Sbjct: 148 NFDEAQKLAEEIVRIDNNVIAAWKMLGECHRQRGNGRVNIE 188
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 31.1 bits (67), Expect = 0.13
Identities = 22/90 (24%), Positives = 39/90 (43%)
Frame = +2
Query: 230 LYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEM 409
L AQV Q + RA+ + L ++P N V +G V + S + KA+ +A+++
Sbjct: 148 LKAQVYIFQNDMDRAQKIAHDVLRLNPKNVEALVLRGKV-MYYSGENAKAITHFQEALKL 206
Query: 410 DDKCDFAYETLGTIEVQRGNLRRSLELFEK 499
D C A + + +LF +
Sbjct: 207 DPDCTTAKTLFKQVRKLENTKNQGNDLFRQ 236
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.5 bits (63), Expect = 0.39
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +2
Query: 206 PRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVK 385
P+ + A V + +++ + + ALA+ PNN +L+ +Q Q +
Sbjct: 73 PKSQFCWHALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGL-YQPLFD 131
Query: 386 LINKAIEMDDKCDFAYETLGTIEV-QRGNLRRSLELFEKAIA 508
N+ +++D + Y T+ GN + SLE + I+
Sbjct: 132 NWNRLLQLDSS-NLEYRLCFTLSAFLSGNYKESLEQIQYLIS 172
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 28.7 bits (61), Expect = 0.68
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 65 RAVELNPDFSIAYIQKCYADYRHAQINKNVGA 160
+A+EL+P+F+ AY++K A + NK + A
Sbjct: 458 KAIELDPNFAKAYVRKAQALFMLKDYNKCIDA 489
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 26.6 bits (56), Expect = 2.7
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 167 QVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLV 346
QV D L+R A+AY A+ L + + A+ V PN+ + +
Sbjct: 120 QVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKECIRLCSLVHPNDPAILALSKEL 179
Query: 347 QLQKSTDFDK 376
Q +KS DF+K
Sbjct: 180 Q-KKSDDFEK 188
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 75 NLIQIFPLPIFKNVMLTIDMHRLIRMLVLWFKSEQILKVLWKDFLD 212
NL++ + +N ML D ++ +L L F + +I + LW+DF +
Sbjct: 2383 NLLKYGIIDFNQNSMLVSDF--VLPVLSLQFSNSKIAEYLWRDFFN 2426
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 284 FDAALAVDPNNATLYVHKGLVQLQKSTDFDKAV 382
FDA L+ DPN T L QL+K F AV
Sbjct: 7 FDATLSADPNTRT-KAELSLKQLEKEPSFVLAV 38
>SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 375
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +2
Query: 203 FPRCAEAYILYAQVLSDQQ--EWGRAE 277
F C E ++ YAQ+LS +Q +W A+
Sbjct: 336 FKNCPEKFLKYAQILSSKQGSDWMSAQ 362
>SPAP27G11.02 |||TPR repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 419 CDFAYETLGTIEVQRGNLRRSLELFEKAIALAKTE 523
C A+ TLG I ++GN+ +L+ ++ + AL K +
Sbjct: 289 CAAAFYTLGQIAERQGNIDLALKHYKNSEALRKDD 323
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 25.8 bits (54), Expect = 4.8
Identities = 24/103 (23%), Positives = 40/103 (38%)
Frame = +2
Query: 233 YAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMD 412
+ Q+ S ++ R F + DP +S + D + L + +
Sbjct: 315 FEQLDSKVEDQNRVNNFFHYSTPKDPIPFVKLFVNCFTDSGESIEVDSSFPLSTQHRYIT 374
Query: 413 DKCDFAYETLGTIEVQRGNLRRSLELFEKAIALAKTELEMTHL 541
D E L +EV RGN R LF+ ++ KT +E T +
Sbjct: 375 DVAWAGNEKLMFVEVLRGNYERVTSLFD--LSSRKTTIENTEV 415
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 365 DFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLE 487
D+ KA+ L KAIE+D Y Q G ++E
Sbjct: 98 DYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVE 138
>SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 764
Score = 25.4 bits (53), Expect = 6.3
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 269 RAEALFDAALAVDPNNATLYVHKGLVQLQK--STDFDKAVKLINKAI 403
RA D ALAV N + V G+V + TDF KA +I KAI
Sbjct: 273 RAPENLDRALAVLGENQIISV--GVVSGRNIWKTDFQKATAIIEKAI 317
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 25.0 bits (52), Expect = 8.4
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +2
Query: 224 YILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAI 403
YI YAQ + G+ + AAL PNNA L+V + + + A L+N+A+
Sbjct: 113 YIHYAQKIKAVNIVGK---ICVAALQKHPNNAELWVVACDHEFSINANVSAARALMNRAL 169
Query: 404 EMDDK 418
++ +
Sbjct: 170 RLNQE 174
>SPAC7D4.09c |||steroid dehydrogenase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 90 FPLPIFKNVMLTIDMHRLIRMLVLWFK 170
FP+PIFKN+ + + +++L+L ++
Sbjct: 88 FPIPIFKNIKEDLMYSKKLQVLLLIYE 114
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +2
Query: 329 VHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEK 499
VH +L++ + KA++ ++AI+ D K A + + I Q ++L + K
Sbjct: 637 VHNDREKLKRQKLYIKAIQSYDQAIKFDPKNAHAAQGIAIILAQNRQFSKALLILSK 693
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 347 QLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQR 463
++ ++ +FD A++L+ +A E DD E L IE+ +
Sbjct: 1641 KITENAEFDLALQLLAEASEFDDLAIRHNEDLINIEINK 1679
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 463 PLYFNGAQGFIGKVTFVIHLDCFIYQFN 380
PL +G GF+G+V +IH Y N
Sbjct: 143 PLIESGTTGFLGQVQVIIHGKTECYDCN 170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,327,506
Number of Sequences: 5004
Number of extensions: 45206
Number of successful extensions: 166
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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